n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_000961: Pyrococcus horikoshii OT3, complete genome
NCBI: NC_000961
Host Lineage: Pyrococcus horikoshii; Pyrococcus; Thermococcaceae; Thermococcales; Euryarchaeota; Archaea
General Information: This organism was isolated from a hydrothermal vent at Okinawa Trough in the Pacific Ocean at a depth of 1395 m. This organism is an obligate anaerobic, hyperthermophilic archaeon. Growth occurs at 80-102 degrees C with optimal growth at 98 degrees C and a pH of 7.0. Presence of elemental sulfur has been found to greatly stimulate growth.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!