Pre_GI Gene

Some Help

Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:338428 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
338428338595168hypothetical protein
338595339245651site-specific recombinase XerCQuickGO ontologyBLASTP
339510339983474hypothetical proteinBLASTP
339985340311327hypothetical proteinBLASTP
340435340743309hypothetical proteinBLASTP
3407303423881659phage terminase-like protein large subunitQuickGO ontologyBLASTP
342403342558156hypothetical protein
3425953437701176phage portal protein HK97 familyQuickGO ontologyBLASTP
343745344485741protease subunit of ATP-dependent proteaseQuickGO ontologyBLASTP
3444873459381452phage capsid family proteinQuickGO ontologyBLASTP
345951346265315hypothetical proteinBLASTP
346262346606345hypothetical proteinBLASTP
346603346998396hypothetical proteinBLASTP
346985347299315hypothetical proteinBLASTP
347312347857546hypothetical proteinBLASTP
347881348180300hypothetical proteinBLASTP
348168348452285hypothetical proteinBLASTP
3484843516393156phage-related minor tail proteinQuickGO ontologyBLASTP
351636352337702hypothetical proteinBLASTP
3524143538951482hypothetical proteinBLASTP
3538973562392343N-terminal ig-like domain of cellulaseQuickGO ontologyBLASTP
3563183573941077protein involved in polysaccharide intercellular adhesin PIA synthesisbiofilm formationQuickGO ontologyBLASTP
3576193588391221beta-glucanasebeta-glucan synthetaseQuickGO ontologyBLASTP
3591103610771968phage minor structural proteinQuickGO ontologyBLASTP
361127361441315hypothetical proteinBLASTP
361447362406960lysozyme M1 14-beta-N-acetylmuramidaseQuickGO ontologyBLASTP