Pre_GI Gene

Some Help

Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2765000 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
276508327661771095spore germination protein amino acid permeaseQuickGO ontologyBLASTP
27662982766498201Bacteriophage holinQuickGO ontology
27665142766657144hypothetical protein
27666692767508840lysozyme M1 14-beta-N-acetylmuramidaseQuickGO ontologyBLASTP
27675282767752225hypothetical protein
276782727704842658protein of unknown function DUF2479QuickGO ontologyBLASTP
27705692771243675hypothetical proteinBLASTP
277126727723041038hypothetical proteinBLASTP
27723182773109792Phage tail proteinQuickGO ontologyBLASTP
27731232773998876hypothetical proteinBLASTP
277402027753901371Prophage tail length tape measure proteinQuickGO ontologyBLASTP
27753772775697321hypothetical protein
27757482776092345hypothetical protein
27761602776717558hypothetical proteinBLASTP
27767462777135390hypothetical protein
27771392777471333hypothetical protein
27774902777807318hypothetical protein
27777972778186390Phage QLRG family putative DNA packagingQuickGO ontology
27782182778382165hypothetical protein
27784022779334933hypothetical proteinBLASTP
27794162780009594hypothetical proteinBLASTP
27801402781042903phage putative head morphogenesis protein SPP1 gp7 familyQuickGO ontologyBLASTP
278101727824591443Phage portal protein SPP1 Gp6QuickGO ontologyBLASTP
278248227842751794hypothetical proteinBLASTP