Pre_GI Gene

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Host: NC_017440 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017440:639595 Chlamydia trachomatis G/11074 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6395956407701176general secretion pathway protein FQuickGO ontologyBLASTP
6407826422871506general secretion pathway protein EQuickGO ontologyBLASTP
6422716445532283general secretion pathway protein DQuickGO ontologyBLASTP
6445546457831230hypothetical proteinBLASTP
6459116469811071proline dipeptidaseQuickGO ontologyBLASTP
6469926487221731DNA mismatch repair proteinQuickGO ontologyBLASTP
649017649715699type III secretion chaperoneQuickGO ontologyBLASTP
649732650091360hypothetical proteinBLASTP
6501286515911464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
6516226529411320hypothetical proteinBLASTP
653019654002984hypothetical proteinBLASTP
6543076562141908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
656665657432768Chromosome partitioning ATPase ParA family proteinQuickGO ontologyBLASTP
657437658228792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
658194658745552hypothetical proteinBLASTP
6589446599841041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6600096620152007excinuclease ABC subunit BQuickGO ontologyBLASTP