Pre_GI Gene

Some Help

Host: NC_017440 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017440:583392 Chlamydia trachomatis G/11074 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5833925843961005glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58444058486542650S ribosomal protein L17QuickGO ontologyBLASTP
5848745860071134DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58602858642639930S ribosomal protein S11QuickGO ontologyBLASTP
58644858681636930S ribosomal protein S13QuickGO ontologyBLASTP
5868725882451374preprotein translocase subunit SecYQuickGO ontologyBLASTP
58826858870243550S ribosomal protein L15QuickGO ontologyBLASTP
58869558919249830S ribosomal protein S5QuickGO ontologyBLASTP
58920758957837250S ribosomal protein L18QuickGO ontologyBLASTP
58960059015155250S ribosomal protein L6QuickGO ontologyBLASTP
59017959058040230S ribosomal protein S8QuickGO ontologyBLASTP
59059859114054350S ribosomal protein L5QuickGO ontologyBLASTP
59114259147733650S ribosomal protein L24QuickGO ontologyBLASTP
59149059185836950S ribosomal protein L14QuickGO ontologyBLASTP
59187559212625230S ribosomal protein S17QuickGO ontologyBLASTP
59211959233721950S ribosomal protein L29QuickGO ontologyBLASTP
59233959275541750S ribosomal protein L16QuickGO ontologyBLASTP
59278859346267530S ribosomal protein S3QuickGO ontologyBLASTP
59347259380733650S ribosomal protein L22QuickGO ontologyBLASTP
59382659409226730S ribosomal protein S19QuickGO ontologyBLASTP
59409859495285550S ribosomal protein L2QuickGO ontologyBLASTP
59497659531133650S ribosomal protein L23QuickGO ontologyBLASTP
59532759599566950S ribosomal protein L4QuickGO ontologyBLASTP
59600459666966650S ribosomal protein L3QuickGO ontologyBLASTP
597104598000897hypothetical proteinBLASTP
598166599116951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
599106599948843UDP-N-acetylglucosamine acyltransferaseQuickGO ontologyBLASTP
5999606004214623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
600418601278861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6013796030071629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
603071603553483acyl-CoA hydrolaseQuickGO ontologyBLASTP
603689604441753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP