Pre_GI Gene

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Host: NC_017439 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017439:639694 Chlamydia trachomatis E/150 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6396946408691176general secretion pathway protein FQuickGO ontologyBLASTP
6408816423861506general secretion pathway protein EQuickGO ontologyBLASTP
6423706446522283general secretion pathway protein DQuickGO ontologyBLASTP
6446536458821230hypothetical proteinBLASTP
6460096470791071proline dipeptidaseQuickGO ontologyBLASTP
6470906488201731DNA mismatch repair proteinQuickGO ontologyBLASTP
649115649813699type III secretion chaperoneQuickGO ontologyBLASTP
649830650189360hypothetical proteinBLASTP
6502296516921464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
6517236530421320hypothetical proteinBLASTP
653120654103984hypothetical proteinBLASTP
654000654179180hypothetical proteinBLASTP
6544086563151908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
656766657533768Chromosome partitioning ATPase ParA family proteinQuickGO ontologyBLASTP
657538658329792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
658295658846552hypothetical proteinBLASTP
6590446600841041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6601096621152007excinuclease ABC subunit BQuickGO ontologyBLASTP