Pre_GI Gene

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Host: NC_017437 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017437:586692 Chlamydia trachomatis A2497 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58669258711742650S ribosomal protein L17QuickGO ontologyBLASTP
5871265883101185DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58828058867839930S ribosomal protein S11QuickGO ontologyBLASTP
58870058906836930S ribosomal protein S13QuickGO ontologyBLASTP
5891245904971374Protein translocase subunitQuickGO ontologyBLASTP
59052059095443550S ribosomal protein L15QuickGO ontologyBLASTP
59094759144449830S ribosomal protein S5QuickGO ontologyBLASTP
59145959183037250S ribosomal protein L18QuickGO ontologyBLASTP
59185259240355250S ribosomal protein L6QuickGO ontologyBLASTP
59243159283240230S ribosomal protein S8QuickGO ontologyBLASTP
59285059339254350S ribosomal protein L5QuickGO ontologyBLASTP
59339459372933650S ribosomal protein L24QuickGO ontologyBLASTP
59374259411036950S ribosomal protein L14QuickGO ontologyBLASTP
59412759437825230S ribosomal protein S17QuickGO ontologyBLASTP
59437159461624650S ribosomal protein L29QuickGO ontologyBLASTP
59459159500741750S ribosomal protein L16QuickGO ontologyBLASTP
59504059571467530S ribosomal protein S3QuickGO ontologyBLASTP
59572459605933650S ribosomal protein L22QuickGO ontologyBLASTP
59607859634426730S ribosomal protein S19QuickGO ontologyBLASTP
59635059720485550S ribosomal protein L2QuickGO ontologyBLASTP
59722859756333650S ribosomal protein L23QuickGO ontologyBLASTP
597579598274696LSU ribosomal protein L1E L4PQuickGO ontologyBLASTP
59825659892166650S ribosomal protein L3QuickGO ontologyBLASTP
599052599228177hypothetical protein
599356600258903hypothetical proteinBLASTP
600413601363951Methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
601353602195843Acyl-acyl-carrier-protein--UDP-N- acetylglucosamine O-acyltransferaseQuickGO ontologyBLASTP
6022076026684623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
602665603540876UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6036266052541629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
60522960532193hypothetical protein
605318605800483acyl-CoA hydrolaseQuickGO ontologyBLASTP
605936606688753Exonuclease family proteinQuickGO ontologyBLASTP