Pre_GI Gene

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Host: NC_017437 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017437:360949 Chlamydia trachomatis A2497 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36094936141947150S ribosomal protein L12QuickGO ontologyBLASTP
36137336189151950S ribosomal protein L10QuickGO ontologyBLASTP
36191336261169950S ribosomal protein L1QuickGO ontologyBLASTP
36263436306543250S ribosomal protein L11QuickGO ontologyBLASTP
363165363713549Transcription antitermination proteinQuickGO ontologyBLASTP
363717363965249Protein translocase subunitQuickGO ontologyBLASTP
3641083653071200Protein translation elongation factor Tu EF-TUQuickGO ontologyBLASTP
365640365861222Bacterial Protein Translation Initiation Factor 1 IF-1QuickGO ontologyBLASTP
366273367184912hypothetical proteinBLASTP
367181367627447SufE protein probably involved in Fe-S center assemblyQuickGO ontologyBLASTP
3676793694811803hypothetical proteinBLASTP
369844370026183hypothetical proteinBLASTP
370207370413207putative membrane associated proteinQuickGO ontologyBLASTP
370747371373627N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
371570372394825triosephosphate isomeraseQuickGO ontologyBLASTP
3723303739581629Exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
373942374160219Exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP
374167374439273putative cytosolic proteinQuickGO ontologyBLASTP
37443637635819231-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
3764553779121458Pyruvate kinaseQuickGO ontologyBLASTP
3779353832955361excinuclease ABC subunit AQuickGO ontologyBLASTP