Pre_GI Gene

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Host: NC_017432 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017432:639531 Chlamydia trachomatis G/9301 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6395316407061176general secretion pathway protein FQuickGO ontologyBLASTP
6407186422231506general secretion pathway protein EQuickGO ontologyBLASTP
6422076444892283general secretion pathway protein DQuickGO ontologyBLASTP
6444906457191230hypothetical proteinBLASTP
6458476469171071proline dipeptidaseQuickGO ontologyBLASTP
6469286486581731DNA mismatch repair proteinQuickGO ontologyBLASTP
648953649651699type III secretion chaperoneQuickGO ontologyBLASTP
649668650027360hypothetical proteinBLASTP
6500646515271464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
6515586528771320hypothetical proteinBLASTP
652955653938984hypothetical proteinBLASTP
653835654014180hypothetical proteinBLASTP
6542436561501908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
656601657368768Chromosome partitioning ATPase ParA family proteinQuickGO ontologyBLASTP
657373658164792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
658130658681552hypothetical proteinBLASTP
6588806599201041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6599456619512007excinuclease ABC subunit BQuickGO ontologyBLASTP