Pre_GI Gene

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Host: NC_017431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017431:639710 Chlamydia trachomatis E/11023 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6397106408851176general secretion pathway protein FQuickGO ontologyBLASTP
6408976424021506general secretion pathway protein EQuickGO ontologyBLASTP
6423866446682283general secretion pathway protein DQuickGO ontologyBLASTP
6446696458981230hypothetical proteinBLASTP
6460256470951071proline dipeptidaseQuickGO ontologyBLASTP
6471066488361731DNA mismatch repair proteinQuickGO ontologyBLASTP
649131649829699type III secretion chaperoneQuickGO ontologyBLASTP
649846650205360hypothetical proteinBLASTP
6502456517081464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
6517396530581320hypothetical proteinBLASTP
653136654119984hypothetical proteinBLASTP
6544246563311908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
656782657549768Chromosome partitioning ATPase ParA family proteinQuickGO ontologyBLASTP
657554658345792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
658311658862552hypothetical proteinBLASTP
6590606601001041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6601256621312007excinuclease ABC subunit BQuickGO ontologyBLASTP