Pre_GI Gene

Some Help

Host: NC_017431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017431:583529 Chlamydia trachomatis E/11023 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5835295845331005glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58457758500242650S ribosomal protein L17QuickGO ontologyBLASTP
5850115861441134DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58616558656339930S ribosomal protein S11QuickGO ontologyBLASTP
58658558695336930S ribosomal protein S13QuickGO ontologyBLASTP
5870095883821374preprotein translocase subunit SecYQuickGO ontologyBLASTP
58840558883943550S ribosomal protein L15QuickGO ontologyBLASTP
58883258932949830S ribosomal protein S5QuickGO ontologyBLASTP
58934458971537250S ribosomal protein L18QuickGO ontologyBLASTP
58973759028855250S ribosomal protein L6QuickGO ontologyBLASTP
59031659071740230S ribosomal protein S8QuickGO ontologyBLASTP
59073559127754350S ribosomal protein L5QuickGO ontologyBLASTP
59127959161433650S ribosomal protein L24QuickGO ontologyBLASTP
59162759199536950S ribosomal protein L14QuickGO ontologyBLASTP
59201259226325230S ribosomal protein S17QuickGO ontologyBLASTP
59225659247421950S ribosomal protein L29QuickGO ontologyBLASTP
59247659289241750S ribosomal protein L16QuickGO ontologyBLASTP
59292559358466030S ribosomal protein S3QuickGO ontologyBLASTP
59359459392933650S ribosomal protein L22QuickGO ontologyBLASTP
59394859421426730S ribosomal protein S19QuickGO ontologyBLASTP
59422059507485550S ribosomal protein L2QuickGO ontologyBLASTP
59509859543333650S ribosomal protein L23QuickGO ontologyBLASTP
59544959611766950S ribosomal protein L4QuickGO ontologyBLASTP
59612659679166650S ribosomal protein L3QuickGO ontologyBLASTP
597226598122897hypothetical proteinBLASTP
598287599237951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
599227600069843UDP-N-acetylglucosamine acyltransferaseQuickGO ontologyBLASTP
6000816005424623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
600539601399861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6015006031281629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
603192603674483acyl-CoA hydrolaseQuickGO ontologyBLASTP
603810604562753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP