Pre_GI Gene

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Host: NC_017219 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017219:2014605 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
201460520159121308serine hydroxymethyltransferaseQuickGO ontologyBLASTP
201613620176261491threonine synthaseQuickGO ontologyBLASTP
201768720188321146hypothetical proteinBLASTP
20188352019284450hypothetical proteinBLASTP
20193752019515141hypothetical protein
20195582019944387hypothetical proteinBLASTP
20199412020654714hypothetical proteinBLASTP
20206572021352696hypothetical proteinBLASTP
20213772022297921ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
20223192022693375transcriptional regulatorQuickGO ontologyBLASTP
20230172023145129hypothetical protein
202392520251931269hypothetical proteinBLASTP
202603720272811245hypothetical proteinBLASTP
20273422027755414hypothetical proteinBLASTP
20285252029172648putative hydrolyaseQuickGO ontologyBLASTP
202916920309621794DNA repair protein RecNQuickGO ontologyBLASTP
203096220319781017kinaseQuickGO ontologyBLASTP
20322592032936678hypothetical proteinBLASTP
20329182033691774hypothetical proteinBLASTP
203394820349881041hypothetical proteinBLASTP
203499720366101614hypothetical proteinBLASTP
203663820379601323tyrosyl-tRNA synthaseQuickGO ontologyBLASTP
20380862038853768hypothetical proteinBLASTP
20388502039383534hypothetical proteinBLASTP