Pre_GI Gene

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Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:954318 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
954318954551234hypothetical proteinBLASTP
954650954919270hypothetical proteinBLASTP
954981955181201hypothetical protein
955413955772360hypothetical proteinBLASTP
95598295605776tRNA-ValQuickGO ontologyBLASTP
95615495643227930S ribosomal protein S20QuickGO ontologyBLASTP
95645195686141150S ribosomal protein L17QuickGO ontologyBLASTP
9568729578941023DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
95791395829638430S ribosomal protein S11QuickGO ontologyBLASTP
95832195869837830S ribosomal protein S13QuickGO ontologyBLASTP
958757959395639adenylate kinaseQuickGO ontologyBLASTP
9594119607121302preprotein translocase subunit SecYQuickGO ontologyBLASTP
96071696117746250S ribosomal protein L15QuickGO ontologyBLASTP
96119196138219250S ribosomal protein L30QuickGO ontologyBLASTP
96140696193653130S ribosomal protein S5QuickGO ontologyBLASTP
96195496231035750S ribosomal protein L18QuickGO ontologyBLASTP
96232696285953450S ribosomal protein L6QuickGO ontologyBLASTP
96286896326639930S ribosomal protein S8QuickGO ontologyBLASTP
96328696359130630S ribosomal protein S14QuickGO ontologyBLASTP
96360996414854050S ribosomal protein L5QuickGO ontologyBLASTP
96414896447733050S ribosomal protein L24QuickGO ontologyBLASTP
96447896484636950S ribosomal protein L14QuickGO ontologyBLASTP
96492196515423430S ribosomal protein S17QuickGO ontologyBLASTP
96515696537121650S ribosomal protein L29QuickGO ontologyBLASTP
96536496577441150S ribosomal protein L16QuickGO ontologyBLASTP
96578996644265430S ribosomal protein S3QuickGO ontologyBLASTP
96644496680336050S ribosomal protein L22QuickGO ontologyBLASTP
96681296709027930S ribosomal protein S19QuickGO ontologyBLASTP
96711596793682250S ribosomal protein L2QuickGO ontologyBLASTP
96793796823329750S ribosomal protein L23QuickGO ontologyBLASTP
96823096885362450S ribosomal protein L4QuickGO ontologyBLASTP
96896496961164850S ribosomal protein L3QuickGO ontologyBLASTP
96961296992931830S ribosomal protein S10QuickGO ontologyBLASTP
969926970060135hypothetical proteinBLASTP
9701709713541185elongation factor TuQuickGO ontologyBLASTP
97165497173986tRNA-TyrQuickGO ontologyBLASTP
971930972652723tRNArRNA methyltransferaseQuickGO ontologyBLASTP