Pre_GI Gene

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Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:178395 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
178395178973579transcription antitermination protein NusGQuickGO ontologyBLASTP
17924517968243850S ribosomal protein L11QuickGO ontologyBLASTP
17968818040772050S ribosomal protein L1QuickGO ontologyBLASTP
18051818102751050S ribosomal protein L10QuickGO ontologyBLASTP
18122218159937850S ribosomal protein L7L12QuickGO ontologyBLASTP
1825441866654122DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1869231910414119DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1914461926151170hypothetical proteinBLASTP
1927801942821503multifunctional aminopeptidase AQuickGO ontologyBLASTP