Pre_GI Gene

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Host: NC_016798 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016798:641842 Chlamydia trachomatis A2497, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis A2497 was isolated from a 2.5-year-old with intense active trachoma in Tanzania. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6418426430171176general secretion pathway protein FQuickGO ontologyBLASTP
6430296445341506general secretion pathway protein EQuickGO ontologyBLASTP
6445186468002283general secretion pathway protein DQuickGO ontologyBLASTP
6468016480301230hypothetical proteinBLASTP
6481586492281071proline dipeptidaseQuickGO ontologyBLASTP
6492396509691731DNA mismatch repair proteinQuickGO ontologyBLASTP
651264651962699type III secretion chaperoneQuickGO ontologyBLASTP
651979652338360hypothetical proteinBLASTP
6523756538381464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
6538696551881320putative type III secretion system proteinQuickGO ontologyBLASTP
655266656249984putative integral membrane proteinQuickGO ontologyBLASTP
6565546584611908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
658912659679768chromosome partitioning ATPaseQuickGO ontologyBLASTP
659684660475792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
660441660992552hypothetical proteinBLASTP
6611916622311041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6622566642622007excinuclease ABC subunit BQuickGO ontologyBLASTP