Pre_GI Gene

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Host: NC_016798 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016798:586689 Chlamydia trachomatis A2497, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis A2497 was isolated from a 2.5-year-old with intense active trachoma in Tanzania. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58668958711442650S ribosomal protein L17PQuickGO ontologyBLASTP
5871235882561134DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58827758867539930S ribosomal protein S11QuickGO ontologyBLASTP
58869758906536930S ribosomal protein S13QuickGO ontologyBLASTP
5891215904941374protein translocase subunitQuickGO ontologyBLASTP
59051759095143550S ribosomal protein L15QuickGO ontologyBLASTP
59094459144149830S ribosomal protein S5QuickGO ontologyBLASTP
59145659182737250S ribosomal protein L18QuickGO ontologyBLASTP
59184959240055250S ribosomal protein L6QuickGO ontologyBLASTP
59242859282940230S ribosomal protein S8QuickGO ontologyBLASTP
59284759338954350S ribosomal protein L5QuickGO ontologyBLASTP
59339159372633650S ribosomal protein L24QuickGO ontologyBLASTP
59373959410736950S ribosomal protein L14QuickGO ontologyBLASTP
59412459437525230S ribosomal protein S17QuickGO ontologyBLASTP
59436859458621950S ribosomal protein L29QuickGO ontologyBLASTP
59458859500441750S ribosomal protein L16QuickGO ontologyBLASTP
59503759571167530S ribosomal protein S3QuickGO ontologyBLASTP
59572159605633650S ribosomal protein L22QuickGO ontologyBLASTP
59607559634126730S ribosomal protein S19QuickGO ontologyBLASTP
59634759720185550S ribosomal protein L2QuickGO ontologyBLASTP
59722559756033650S ribosomal protein L23QuickGO ontologyBLASTP
59757659824466950S ribosomal protein L1EQuickGO ontologyBLASTP
59825359891866650S ribosomal protein L3QuickGO ontologyBLASTP
599353600249897hypothetical proteinBLASTP
600410601360951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
601350602192843acyl-acyl-carrier-protein--UDP-N- acetylglucosamine O-acyltransferaseQuickGO ontologyBLASTP
6022046026654623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
602662603522861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6036236052511629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
605315605797483acyl-CoA hydrolaseQuickGO ontologyBLASTP
605933606685753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP