Pre_GI Gene

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Host: NC_016798 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016798:360945 Chlamydia trachomatis A2497, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis A2497 was isolated from a 2.5-year-old with intense active trachoma in Tanzania. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36094536133739350S ribosomal protein L12PQuickGO ontologyBLASTP
36136936188751950S ribosomal protein L10QuickGO ontologyBLASTP
36190936260769950S ribosomal protein L1QuickGO ontologyBLASTP
36263036305542650S ribosomal protein L11QuickGO ontologyBLASTP
363161363709549transcription antitermination proteinQuickGO ontologyBLASTP
363713363961249protein translocase subunitQuickGO ontologyBLASTP
3641043652881185translation elongation factor TuQuickGO ontologyBLASTP
365636365857222protein translation initiation factor 1 IF-1QuickGO ontologyBLASTP
366269367180912hypothetical proteinBLASTP
367177367623447hypothetical proteinBLASTP
369841370023183hypothetical proteinBLASTP
370744371370627N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
371567372391825triosephosphate isomeraseQuickGO ontologyBLASTP
3724053739551551exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
373939374157219exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP
374164374436273hypothetical proteinBLASTP
37443337635519231-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
3764523779091458pyruvate kinaseQuickGO ontologyBLASTP
3779323832925361excinuclease ABC subunit AQuickGO ontologyBLASTP