Pre_GI Gene

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Host: NC_015744 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015744:668665 Chlamydia trachomatis L2c chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain was isolated from a man with severe proctitis. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6686656728554191DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
6728806766383759DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
676999677391393ribosomal protein L7L12QuickGO ontologyBLASTP
677423677941519ribosomal protein L10 family proteinQuickGO ontologyBLASTP
677963678661699ribosomal protein L1QuickGO ontologyBLASTP
678684679109426ribosomal protein L11QuickGO ontologyBLASTP
679215679763549transcription terminationantitermination factor NusGQuickGO ontologyBLASTP
679767680015249preprotein translocase SecE subunitQuickGO ontologyBLASTP
6801586813421185translation elongation factor TuQuickGO ontologyBLASTP
681690681911222translation initiation factor IF-1QuickGO ontologyBLASTP
681986682108123hypothetical protein
682324683235912hypothetical proteinBLASTP
683232683678447fe-S metabolism associated domain proteinQuickGO ontologyBLASTP
6841576855001344hypothetical proteinBLASTP
685497685700204hypothetical proteinBLASTP
685890686072183hypothetical proteinBLASTP
686795687421627N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
687716688441726triose-phosphate isomeraseQuickGO ontologyBLASTP
6884556900051551exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
689989690207219exonuclease VII small subunitQuickGO ontologyBLASTP
690214690486273hypothetical proteinBLASTP
69048369240519231-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
6925026939591458pyruvate kinaseQuickGO ontologyBLASTP
6939826993425361excinuclease ABC A subunitQuickGO ontologyBLASTP