Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:986382 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
986382987344963integrase family proteinQuickGO ontologyBLASTP
987572988036465hypothetical proteinBLASTP
988314989030717Phage terminase small subunitQuickGO ontologyBLASTP
9890329902911260phage terminase large subunit PBSX familyQuickGO ontologyBLASTP
9904319918401410Bacteriophage portal protein SPP1 Gp6-like proteinQuickGO ontologyBLASTP
9918539934451593minor capsid 2 proteinQuickGO ontologyBLASTP
993445993744300hypothetical protein
993809993955147hypothetical protein
993952994179228Protein of unknown function DUF2188QuickGO ontologyBLASTP
994449995036588minor structural GP20 proteinQuickGO ontologyBLASTP
9950579963971341hypothetical proteinBLASTP
996414996791378hypothetical proteinBLASTP
996793997185393hypothetical proteinBLASTP
997185997610426Minor capsidQuickGO ontology
997607998020414hypothetical proteinBLASTP
998034998537504hypothetical protein
998562998912351hypothetical proteinBLASTP
998912999484573Gp15 family proteinQuickGO ontologyBLASTP
999497999631135hypothetical protein
99966910033073639phage tail tape measure protein TP901 familyQuickGO ontologyBLASTP
10032971003641345hypothetical protein
100365110049311281hypothetical protein
10049431005464522hypothetical protein
10055441005777234hypothetical protein
10057981005980183hypothetical protein
10060521006816765hypothetical protein
10068061007804999hypothetical protein