Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:820723 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
820723821580858peptidase U61 LD-carboxypeptidase AQuickGO ontologyBLASTP
821728822594867dimethyladenosine transferaseQuickGO ontologyBLASTP
822814823434621Galactoside O-acetyltransferaseQuickGO ontologyBLASTP
823750823995246Tail Collar domain proteinQuickGO ontologyBLASTP
8240858254041320coagulation factor 58 type domain proteinQuickGO ontologyBLASTP
8255938309715379S-layer domain-containing proteinQuickGO ontologyBLASTP
8322618332621002ABC-type transporter periplasmic subunitQuickGO ontologyBLASTP
8332648342861023ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
834286835053768Iron-chelate-transporting ATPaseQuickGO ontologyBLASTP
8358328368601029phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
836861837805945Prephenate dehydrataseQuickGO ontologyBLASTP
837903839663176167 kDa myosin-cross-reactive antigen family proteinQuickGO ontologyBLASTP
840138840782645hypothetical protein
840801841154354hypothetical protein
841170841412243hypothetical protein
8414328450643633multicopper oxidase type 3QuickGO ontologyBLASTP