Pre_GI Gene

Some Help

Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:443213 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
443213444184972biotin synthaseQuickGO ontologyBLASTP
444448445014567regulatory protein TetRQuickGO ontologyBLASTP
4450174461201104Respiratory-chain NADH dehydrogenase domain 51 kDa subunitQuickGO ontologyBLASTP
446134446670537hypothetical protein
446675447040366hypothetical proteinBLASTP
447207447866660HAD-superfamily hydrolase subfamily IA variant 3QuickGO ontologyBLASTP
4481184515973480hypothetical proteinBLASTP
452041452913873hypothetical protein
453184453852669two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
4538524548771026integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
454971455723753Polyamine-transporting ATPaseQuickGO ontologyBLASTP
4557234576301908protein of unknown function DUF214QuickGO ontologyBLASTP
4578544593471494phytoene desaturaseQuickGO ontologyBLASTP
459390459620231hypothetical protein
459976460971996hypothetical protein