Pre_GI Gene

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Host: NC_014034 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014034:152264 Rhodobacter capsulatus SB1003 chromosome, complete genome

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
152264153085822hypothetical protein
153151154077927electron transfer flavoprotein subunit alphaQuickGO ontologyBLASTP
154077154835759electron transfer flavoprotein subunit betaQuickGO ontologyBLASTP
154991155830840short-chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
1558941581972304DNA topoisomerase IV subunit AQuickGO ontologyBLASTP
1584271596021176translation elongation factor Tu-1QuickGO ontologyBLASTP
160332161786145516S ribosomal RNAQuickGO ontologyBLASTP
16194616202176tRNA-AlaQuickGO ontologyBLASTP
16202616210378tRNA-IleQuickGO ontology
162380165262288323S ribosomal RNAQuickGO ontologyBLASTP
1654081655251185S ribosomal RNAQuickGO ontologyBLASTP
16559416567077tRNA-MetQuickGO ontology
1658701697363867CDA peptide synthetase IIIQuickGO ontologyBLASTP
169729170292564hypothetical proteinBLASTP
170434170931498hypothetical proteinBLASTP
1709431723251383oxygen-independent coproporphyrinogen-III oxidase-1QuickGO ontologyBLASTP
1730361745381503peptide ABC transporter periplasmic peptide-binding proteinQuickGO ontologyBLASTP
174535175479945peptide ABC transporter permeaseQuickGO ontologyBLASTP
175476176249774peptide ABC transporter permeaseQuickGO ontologyBLASTP
1762461776311386peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP