Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:7162030 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
71611947162033840hypothetical protein
71620307162608579regulatory proteinQuickGO ontology
71626057162907303phage-encoded proteinQuickGO ontology
71630377163597561hypothetical protein
71635947164358765hypothetical protein
71643557164960606hypothetical protein
71652097165589381hypothetical protein
71655867165834249hypothetical protein
716592671669301005hypothetical protein
71670207167295276hypothetical protein
71672927167906615hypothetical proteinBLASTP
71679037168523621hypothetical proteinBLASTP
71685407168959420hypothetical protein
71689567169444489hypothetical protein
71695617170280720hypothetical proteinBLASTP
71703617170705345hypothetical protein
71707027171046345hypothetical protein
71711737171364192hypothetical protein
71714667171816351phage endonucleaseQuickGO ontology
71718367172066231hypothetical protein
71721847172663480phage terminase small subunitQuickGO ontologyBLASTP
717263271744281797phage terminase large subunitQuickGO ontologyBLASTP
717444471757871344phage portal proteinQuickGO ontologyBLASTP
71757847176482699hypothetical proteinBLASTP
71764857176763279hypothetical protein
71767667177569804phage prohead proteaseQuickGO ontologyBLASTP
717756671788611296phage major capsid proteinQuickGO ontologyBLASTP
71788617179244384mobile element proteinQuickGO ontology
71792417179741501mobile element proteinQuickGO ontology
71797447180286543mobile element proteinQuickGO ontology
71802867180627342hypothetical protein
71806247180929306phage proteinQuickGO ontology
71809297181312384hypothetical protein
71813727182343972hypothetical proteinBLASTP