Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:6923884 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
692388469258181935ABC transporterQuickGO ontologyBLASTP
692581869275511734ABC transporterQuickGO ontologyBLASTP
692773569291891455sugar kinaseQuickGO ontologyBLASTP
69292596929573315hypothetical proteinBLASTP
6929739692981173tRNA-AsnQuickGO ontology
6929818692989073tRNA-AsnQuickGO ontology
69306416931072432hypothetical protein
69313246931437114hypothetical protein
69315316931947417DNA-binding proteinQuickGO ontologyBLASTP
69322976932419123hypothetical protein
693256469336071044hypothetical protein
69338316934220390hypothetical proteinBLASTP
69342176934555339DNA-binding proteinQuickGO ontologyBLASTP
69349766935125150hypothetical protein
69356186936241624TetR family transcriptional regulatorQuickGO ontologyBLASTP
69364566937271816oxidoreductaseQuickGO ontologyBLASTP
693730769390251719thioredoxin reductaseQuickGO ontologyBLASTP
693902269405061485two-component sensor kinaseQuickGO ontologyBLASTP
69406996941577879hydrolaseQuickGO ontologyBLASTP