Pre_GI Gene

Some Help

Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:1537980 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15379801538756777hypothetical protein
15389261539540615transcriptional regulatorQuickGO ontologyBLASTP
15398191540622804hypothetical proteinBLASTP
15406191541599981hypothetical protein
154164415436622019phospholipase CQuickGO ontologyBLASTP
154439715459351539hypothetical protein
15459771546507531hypothetical protein
15466911547404714hypothetical proteinBLASTP
15484071548718312hypothetical protein
15487621549760999hypothetical proteinBLASTP
15501271550531405hypothetical proteinBLASTP
15506471550799153hypothetical protein
155105515522181164oxidoreductaseQuickGO ontologyBLASTP
15522721552463192hypothetical protein
15524601553407948short chain dehydrogenasereductaseQuickGO ontologyBLASTP
15534041553526123hypothetical protein
15535871554390804hydrolaseQuickGO ontologyBLASTP
155512215563601239hypothetical proteinBLASTP
15564031556558156hypothetical protein
155674915580561308transporterQuickGO ontology
15584051559028624transcriptional regulatorQuickGO ontologyBLASTP
15595841559943360hypothetical proteinBLASTP
155997615613341359hypothetical proteinBLASTP