Pre_GI Gene

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Host: NC_013410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013410:1491000 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
149111614945383423phosphoglycerate mutaseQuickGO ontologyBLASTP
149458214972332652hypothetical proteinBLASTP
14973101498293984ATPase AAAQuickGO ontologyBLASTP
14984981499256759hypothetical proteinBLASTP
14992911499950660hypothetical proteinBLASTP
15001841501020837DNA-damage-inducible protein DQuickGO ontologyBLASTP
15012201501903684hypothetical proteinBLASTP
15021661502483318TfoX domain-containing proteinQuickGO ontologyBLASTP
15025501502882333small multidrug resistance proteinQuickGO ontologyBLASTP
15028961503741846hypothetical protein
150374815048091062acyltransferase 3QuickGO ontologyBLASTP
150480915058791071hypothetical protein
150600615074541449glycoside hydrolase family proteinQuickGO ontologyBLASTP
15074671507586120hypothetical protein
15076401508608969hypothetical proteinBLASTP
150866015096641005hypothetical proteinBLASTP
15098391510768930hypothetical proteinBLASTP