Pre_GI Gene

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Host: NC_013316 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:2968000 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
296811729693911275putative extracellular solute-binding proteinQuickGO ontologyBLASTP
296967529708351161cell division proteinQuickGO ontologyBLASTP
29710222971375354hypothetical proteinBLASTP
29714742972148675hypothetical proteinBLASTP
29721532972851699hypothetical proteinBLASTP
29728742973578705putative cell division proteinQuickGO ontologyBLASTP
297388429751101227UDP-N-acetylglucosamine--N-acetylmuramyl-penta peptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseQuickGO ontologyBLASTP
297512829762581131cell divisionstage V sporulation proteinQuickGO ontologyBLASTP
297631029776651356UDP-N-acetylmuramoylalanine--D-glutamate ligaseQuickGO ontologyBLASTP
29776842978652969phospho-N-acetylmuramoyl-pentapeptide-transfera seQuickGO ontologyBLASTP
297869329800661374UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligaseQuickGO ontologyBLASTP
298023329822121980stage V sporulation protein D sporulation specific penicillin-binding proteinQuickGO ontologyBLASTP
29822242982571348hypothetical proteinBLASTP
29830572983992936S-adenosyl-methyltransferaseQuickGO ontologyBLASTP
29840222984768747prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
298516529864661302putative peptidaseQuickGO ontologyBLASTP
298646629877311266putative peptidaseQuickGO ontologyBLASTP
298804729891441098putative GTP-binding proteinQuickGO ontologyBLASTP
298962329919022280putative signaling proteinQuickGO ontologyBLASTP