Pre_GI Gene

Some Help

Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:1363724 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136372413649621239aminotransferaseQuickGO ontologyBLASTP
13654541366374921lipid A biosynthesis palmitoleoyl acyltransferaseQuickGO ontologyBLASTP
13667271366969243hypothetical proteinBLASTP
13670461367321276hypothetical proteinBLASTP
13676171368249633hypothetical proteinBLASTP
136876213700121251formyl-coenzyme A transferaseQuickGO ontologyBLASTP
137006613717601695oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
13718301372774945transporter YfdVQuickGO ontologyBLASTP
137284813739931146hypothetical proteinBLASTP
137404913776423594hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP
13776471378261615EvgA family transcriptional regulatorQuickGO ontologyBLASTP
137867713798401164efflux pump membrane proteinQuickGO ontologyBLASTP
137984013813781539drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
138148613828141329D-serine dehydrataseQuickGO ontologyBLASTP