Pre_GI Gene

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Host: NC_012687 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012687:586657 Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis B/Jali20/OT is a clinical strain isolated from the conjunctiva in an active case of trachoma. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58665758708242650S ribosomal protein L17QuickGO ontologyBLASTP
5870915882241134DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58824558864339930S ribosomal protein S11QuickGO ontologyBLASTP
58866558903336930S ribosomal protein S13QuickGO ontologyBLASTP
5890895904621374preprotein translocase subunit SecYQuickGO ontologyBLASTP
59048559091943550S ribosomal protein L15QuickGO ontologyBLASTP
59091259140949830S ribosomal protein S5QuickGO ontologyBLASTP
59142459179537250S ribosomal protein L18QuickGO ontologyBLASTP
59181759236855250S ribosomal protein L6QuickGO ontologyBLASTP
59239659279740230S ribosomal protein S8QuickGO ontologyBLASTP
59281559335754350S ribosomal protein L5QuickGO ontologyBLASTP
59335959369433650S ribosomal protein L24QuickGO ontologyBLASTP
59370759407536950S ribosomal protein L14QuickGO ontologyBLASTP
59409259434325230S ribosomal protein S17QuickGO ontologyBLASTP
59433659455421950S ribosomal protein L29QuickGO ontologyBLASTP
59455659497241750S ribosomal protein L16QuickGO ontologyBLASTP
59500559567967530S ribosomal protein S3QuickGO ontologyBLASTP
59568959602433650S ribosomal protein L22QuickGO ontologyBLASTP
59604359630926730S ribosomal protein S19QuickGO ontologyBLASTP
59631559716985550S ribosomal protein L2QuickGO ontologyBLASTP
59719359752833650S ribosomal protein L23QuickGO ontologyBLASTP
59754459821266950S ribosomal protein L4QuickGO ontologyBLASTP
59822159888666650S ribosomal protein L3QuickGO ontologyBLASTP
599321600217897hypothetical proteinBLASTP
600378601328951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
601318602160843UDP-N-acetylglucosamine acyltransferaseQuickGO ontologyBLASTP
6021726026334623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
602630603490861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6035916052191629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
605283605765483acyl-CoA hydrolaseQuickGO ontologyBLASTP
605901606653753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP