Pre_GI Gene

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Host: NC_012686 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012686:356865 Chlamydia trachomatis B/Jali20/OT chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis B/Jali20/OT is a clinical strain isolated from the conjunctiva in an active case of trachoma. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3568653606233759DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
36098436137639350S ribosomal protein L7L12QuickGO ontologyBLASTP
36140836192651950S ribosomal protein L10QuickGO ontologyBLASTP
36194836264669950S ribosomal protein L1QuickGO ontologyBLASTP
36266936309442650S ribosomal protein L11QuickGO ontologyBLASTP
363200363748549transcription antitermination protein NusGQuickGO ontologyBLASTP
363752364000249preprotein translocase subunit SecEQuickGO ontologyBLASTP
36403136410373tRNA-TrpQuickGO ontology
3641433653271185elongation factor TuQuickGO ontologyBLASTP
36537436544572tRNA-ThrQuickGO ontology
365675365896222translation initiation factor IF-1QuickGO ontologyBLASTP
366308367219912hypothetical proteinBLASTP
367216367662447hypothetical proteinBLASTP
369887370069183hypothetical proteinBLASTP
370790371416627N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
371613372437825triosephosphate isomeraseQuickGO ontologyBLASTP
3724513740011551exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
373985374203219exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP
374210374482273hypothetical proteinBLASTP
37447937640119231-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
3764983779551458pyruvate kinaseQuickGO ontologyBLASTP