Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:874457 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8744578760881632hybrid cluster proteinQuickGO ontologyBLASTP
876246877142897glycoside hydrolase family 11QuickGO ontologyBLASTP
8772858783281044PpiC-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
8785658802981734glycoside hydrolase family 26QuickGO ontologyBLASTP
8803338826692337glycoside hydrolase family 9QuickGO ontologyBLASTP
8828438841261284transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
8845788865181941glycoside hydrolase family 9QuickGO ontologyBLASTP
886709886912204glutamine-richQuickGO ontologyBLASTP
887840889480164116S ribosomal RNAQuickGO ontologyBLASTP
88967888975477tRNA-IleQuickGO ontology
890279893322304423S ribosomal RNAQuickGO ontologyBLASTP
8935828936971165S ribosomal RNAQuickGO ontologyBLASTP
894101894412312ribosomal protein S10QuickGO ontologyBLASTP
894517895155639ribosomal protein L3QuickGO ontologyBLASTP
895180895803624ribosomal protein L4L1eQuickGO ontologyBLASTP
895803896156354Ribosomal protein L25L23QuickGO ontologyBLASTP
896183897016834ribosomal protein L2QuickGO ontologyBLASTP
897095897376282ribosomal protein S19QuickGO ontologyBLASTP
897441897917477ribosomal protein L22QuickGO ontologyBLASTP
897937898605669ribosomal protein S3QuickGO ontologyBLASTP
898605899042438ribosomal protein L16QuickGO ontologyBLASTP
899032899235204ribosomal protein L29QuickGO ontologyBLASTP
899358899615258ribosomal protein S17QuickGO ontologyBLASTP
899659900027369ribosomal protein L14QuickGO ontologyBLASTP
900046900396351ribosomal protein L24QuickGO ontologyBLASTP