Pre_GI Gene

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Host: NC_011593 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:1651635 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
165163516526811047regulatory protein LacIQuickGO ontologyBLASTP
165347016546031134glycerate kinaseQuickGO ontologyBLASTP
165463416558121179oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
165587616577561881GTP-binding protein LepAQuickGO ontologyBLASTP
1657903165816326130S ribosomal protein S20QuickGO ontologyBLASTP
16583751659145771hypothetical proteinBLASTP
16596751660607933MazG nucleotide pyrophosphohydrolaseQuickGO ontologyBLASTP
166092816623191392phage integrase family proteinQuickGO ontologyBLASTP
16624101662847438hypothetical proteinBLASTP
16628471663350504hypothetical proteinBLASTP
16634221664042621hypothetical proteinBLASTP
16641051664407303hypothetical proteinBLASTP
16645031664865363hypothetical proteinBLASTP
16648881665250363helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
16653201665613294hypothetical proteinBLASTP
16659251666140216hypothetical proteinBLASTP
16663191666684366hypothetical protein
16668521667205354hypothetical proteinBLASTP
16672051667483279hypothetical proteinBLASTP
16676311668482852hypothetical proteinBLASTP
16684731669057585hypothetical proteinBLASTP
16690861669982897hypothetical proteinBLASTP
16701671670700534single-strand binding proteinQuickGO ontologyBLASTP
16706931671046354hypothetical proteinBLASTP
16711591672100942hypothetical proteinBLASTP
16724041672937534hypothetical proteinBLASTP
16730521673414363hypothetical proteinBLASTP
16734111673656246hypothetical proteinBLASTP
16739221674434513hypothetical proteinBLASTP