Pre_GI Gene

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Host: NC_010287 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010287:957862 Chlamydia trachomatis 434/Bu, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This is a biovar, serovar L2 strain. Serovar L2 strains are associated with sexually transmitted infections. L2 strains cause lymphogranuloma vernerum, a systemic infection which infects monocytes and spreads to lymph nodes causing swelling. Causes disease in either the eye or the urogenital tract. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9578629590371176general secretion pathway protein FQuickGO ontologyBLASTP
9590499605541506general secretion pathway protein EQuickGO ontologyBLASTP
9605389628202283general secretion pathway protein DQuickGO ontologyBLASTP
9628219640501230hypothetical proteinBLASTP
9641799652491071proline dipeptidaseQuickGO ontologyBLASTP
9652609669901731DNA mismatch repair proteinQuickGO ontologyBLASTP
967270967968699type III secretion chaperone low calcium response protein HQuickGO ontologyBLASTP
9683819698441464putative type III secretion system membrane proteinQuickGO ontologyBLASTP
9698759711941320putative type III secretion system proteinQuickGO ontologyBLASTP
971272972255984putative integral membrane proteinQuickGO ontologyBLASTP
9725609744671908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
974919975686768Chromosome partitioning ATPase ParA familyQuickGO ontologyBLASTP
975691976482792virulence plasmid protein pGP6-D-related proteinQuickGO ontologyBLASTP
976448976999552hypothetical proteinBLASTP
9771789782181041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
9782439802492007excinuclease ABC subunit BQuickGO ontologyBLASTP