Pre_GI Gene

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Host: NC_010280 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010280:673211 Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain is a variant of the L2 serovar. Serovar L2 strains are associated with sexually transmitted infections and cause lymphogranuloma vernerum, a systemic infection involving the lymph nodes. Chlamydia trachomatis L2b/UCH-1/proctitis was isolated from a recent outbreak of proctitis in Europe. Causes disease in either the eye or the urogenital tract. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6732116769693759DNA-directed RNA polymerase beta chainQuickGO ontologyBLASTP
677330677722393LSU ribosomal protein L12P L7L12QuickGO ontologyBLASTP
677754678272519LSU ribosomal protein L10PQuickGO ontologyBLASTP
678294678992699LSU ribosomal protein L1PQuickGO ontologyBLASTP
679015679440426LSU ribosomal protein L11PQuickGO ontologyBLASTP
679546680094549transcription antitermination proteinQuickGO ontologyBLASTP
680098680346249protein translocase subunitQuickGO ontologyBLASTP
6804896816731185translation elongation factor TuQuickGO ontologyBLASTP
682021682242222bacterial protein translation initiation factor 1 IF-1QuickGO ontologyBLASTP
682653683564912hypothetical proteinBLASTP
683561684007447hypothetical proteinBLASTP
686220686402183hypothetical proteinBLASTP
687125687751627N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
687947688771825triosephosphate isomeraseQuickGO ontologyBLASTP
6887856903351551exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
690319690537219exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP
690544690816273hypothetical proteinBLASTP
69081369273519231-deoxy-D-xylulose 5-phosphate synthaseQuickGO ontologyBLASTP
6928326942891458pyruvate kinaseQuickGO ontologyBLASTP