Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4703500 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47037104704465756Cytidylate kinase-like proteinQuickGO ontologyBLASTP
47046944705278585ABC transporter relatedQuickGO ontologyBLASTP
47053644706224861binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
47064584707231774tryptophan synthase alpha subunitQuickGO ontologyBLASTP
470722447084081185tryptophan synthase beta subunitQuickGO ontologyBLASTP
47084434709099657Phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
47092064710021816Indole-3-glycerol-phosphate synthaseQuickGO ontologyBLASTP
471002547110351011anthranilate phosphoribosyltransferaseQuickGO ontologyBLASTP
47110444711616573glutamine amidotransferase of anthranilate synthaseQuickGO ontologyBLASTP
471161347130791467anthranilate synthase component IQuickGO ontologyBLASTP
47137004714179480hypothetical proteinBLASTP
471423347157411509flagellin domain proteinQuickGO ontologyBLASTP
471576247191723411hypothetical protein
471960447213641761protein of unknown function DUF885QuickGO ontologyBLASTP
472188847235551668phosphoenolpyruvate carboxykinase ATPQuickGO ontologyBLASTP
472414547265382394glycosyltransferase 36QuickGO ontologyBLASTP