Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4250828 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
425082842525701743methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
425470542564621758Pyrrolo-quinoline quinoneQuickGO ontology
42568034257216414hypothetical protein
425728142586391359DNA repair protein RadAQuickGO ontologyBLASTP
42586834259096414hypothetical proteinBLASTP
425936642618402475ATPase AAA-2 domain proteinQuickGO ontologyBLASTP
426185942628901032ATPguanido phosphotransferaseQuickGO ontologyBLASTP
42629064263427522UvrBUvrC proteinQuickGO ontologyBLASTP
42634384263818381transcriptional regulator GntR familyQuickGO ontologyBLASTP
426405742653071251hypothetical proteinBLASTP
426547142693163846SH3 type 3 domain proteinQuickGO ontologyBLASTP
426968242709531272phosphoribosylamine--glycine ligaseQuickGO ontologyBLASTP
42710094271632624phosphoribosylglycinamide formyltransferaseQuickGO ontologyBLASTP
427162642726511026phosphoribosylformylglycinamidine cyclo-ligaseQuickGO ontologyBLASTP