Pre_GI Gene

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Host: NC_009879 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009879:556000 Rickettsia canadensis str. McKiel, complete genome

Host Lineage: Rickettsia canadensis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism was originally isolated from ticks in a field study on tick-transmitted diseases of small mammals in Canada. Member of the typhus group of Rickettsiales. Members of this genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens. In both groups, the bacteria are transmitted via an insect, usually a tick, to a host organism where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia canadensis was originally thought to be a member of the typhus group of Rickettsiales, however, it is now thought to represent a distict group with the rickettsia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
55612955620577tRNA-ValQuickGO ontology
556444556833390hypothetical proteinBLASTP
557416557580165hypothetical protein
557495557692198hypothetical protein
557898558209312Integrase catalytic regionQuickGO ontologyBLASTP
558971559678708hypothetical proteinBLASTP
5597075607981092hypothetical proteinBLASTP
5608055621151311Prolinebetaine transporterQuickGO ontologyBLASTP
562214562435222Conjugal transfer protein TraDQuickGO ontologyBLASTP
563083563202120Conjugal transfer protein TraAQuickGO ontologyBLASTP
563202563384183Conjugal transfer protein TraAQuickGO ontologyBLASTP
563521563775255Conjugal transfer protein TraAQuickGO ontologyBLASTP
564150564296147Conjugal transfer protein TraAQuickGO ontologyBLASTP
564286564438153hypothetical protein
564556564789234Conjugal transfer protein TraAQuickGO ontologyBLASTP
565561566427867Conjugal transfer protein TraAQuickGO ontologyBLASTP
566393566539147Putative conjugative transfer protein TraDQuickGO ontologyBLASTP
566600566956357Putative conjugative transfer protein TraDQuickGO ontologyBLASTP
567115567324210Tetratricopeptide repeat-containing proteinQuickGO ontologyBLASTP
567420567593174Tetratricopeptide repeat-containing proteinQuickGO ontology
567678567809132hypothetical protein
568354568881528Conjugative transfer protein TraGQuickGO ontologyBLASTP
569712569855144hypothetical proteinBLASTP
570724570942219hypothetical proteinBLASTP
571020571616597hypothetical protein
571895572290396hypothetical protein