Pre_GI Gene

Some Help

Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:3862044 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
386204438643922349Rhs element Vgr proteinQuickGO ontologyBLASTP
386449638670992604AAA ATPaseQuickGO ontologyBLASTP
38671023868085984hypothetical proteinBLASTP
386807838699221845hypothetical proteinBLASTP
38699553870398444hypothetical proteinBLASTP
38704723870990519hypothetical proteinBLASTP
387115338726551503hypothetical proteinBLASTP
38726643873224561hypothetical proteinBLASTP
387323538742481014ImpA domain-containing proteinQuickGO ontologyBLASTP
38745783875321744hypothetical proteinBLASTP
38765443877164621ribosomal large subunit pseudouridine synthase AQuickGO ontologyBLASTP
38774813878314834Dna-J like membrane chaperone proteinQuickGO ontologyBLASTP
387849938808412343organic solvent tolerance proteinQuickGO ontologyBLASTP
388090938822131305peptidyl-prolyl cis-trans isomerase SurAQuickGO ontologyBLASTP
388219738831929964-hydroxythreonine-4-phosphate dehydrogenaseQuickGO ontologyBLASTP
38831853884003819dimethyladenosine transferaseQuickGO ontologyBLASTP
38840173884394378ApaG proteinQuickGO ontologyBLASTP
38844113885280870diadenosine tetraphosphataseQuickGO ontologyBLASTP
38853703885834465hypothetical proteinBLASTP