Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:5357567 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53575675358226660hypothetical protein
53584555358853399hypothetical protein
53592185360024807stationary-phase survival protein SurEQuickGO ontologyBLASTP
53606905361685996phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
53617965362536741hypothetical protein
536312153649861866ATP-dependent metalloprotease FtsHQuickGO ontologyBLASTP
53652105365992783protein of unknown function DUF1568QuickGO ontologyBLASTP
53663495367179831hypothetical protein
536735753720694713filamentous haemagglutinin family outer membrane proteinQuickGO ontologyBLASTP
537219553747172523Tetratricopeptide regionQuickGO ontologyBLASTP
537526553794404176filamentous haemagglutinin family outer membrane proteinQuickGO ontologyBLASTP
537959253823092718ATPase AAA-2QuickGO ontologyBLASTP