Pre_GI Gene

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Host: NC_006576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006576:1743500 Synechococcus elongatus PCC 6301, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
174383517457721938DNA topoisomerase IV subunit BQuickGO ontologyBLASTP
17459001746820921tRNA delta2-isopentenylpyrophosphate transferaseQuickGO ontologyBLASTP
17469151747151237hypothetical proteinBLASTP
17472731747881609hypothetical proteinBLASTP
17479531748171219hypothetical proteinBLASTP
174847917500591581hypothetical proteinBLASTP
17507951751487693hypothetical proteinBLASTP
175170417531041401hypothetical proteinBLASTP
175371617549481233hypothetical proteinBLASTP
17549361755838903hypothetical proteinBLASTP
17558431756394552pilin-like proteinQuickGO ontologyBLASTP
17569101757284375photosystem II reaction center W proteinQuickGO ontologyBLASTP
17573001758196897hypothetical proteinBLASTP
17581931758570378hypothetical proteinBLASTP
175866817600681401argininosuccinate lyaseQuickGO ontologyBLASTP
17601761760337162hypothetical proteinBLASTP
176039317617811389hypothetical proteinBLASTP
176196117635171557signal recognition particle subunit SRP54QuickGO ontologyBLASTP
17635321764173642transcription antitermination protein NusBQuickGO ontologyBLASTP
17643201765126807hypothetical proteinBLASTP
17653111766081771hypothetical protein