Pre_GI Gene

Some Help

Host: NC_003228 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003228:4449072 Bacteroides fragilis NCTC 9343, complete genome

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
444907244508051734hypothetical proteinBLASTP
445084844527491902putative exported thioredoxinQuickGO ontologyBLASTP
445284044539461107hypothetical proteinBLASTP
44539554454680726tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
44547234455529807putative hydrolaseQuickGO ontologyBLASTP
445554144565601020branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
44566064456818213putative exodeoxyribonuclease VII small subunitQuickGO ontologyBLASTP
445691444581461233exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
445815044595051356putative exported serine protease subtilase familyQuickGO ontologyBLASTP
445953344606211089putative tRNA methyltransferaseQuickGO ontologyBLASTP
44613724461632261hypothetical proteinBLASTP
44615694462429861hypothetical proteinBLASTP
446242644634361011hypothetical proteinBLASTP
44634654463944480putative 2-C-methyl-D-erythritol 24-cyclodiphosphate synthaseQuickGO ontologyBLASTP
44639834464597615putative hydrolaseQuickGO ontologyBLASTP
44646014465263663redox-sensing transcriptional repressor RexQuickGO ontologyBLASTP
44654404465790351putative translation initation factorQuickGO ontologyBLASTP
44659804466972993elongation factor TsQuickGO ontologyBLASTP
4467096446793283730S ribosomal protein S2QuickGO ontologyBLASTP