Pre_GI Gene

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Host: NC_002488 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002488:2502000 Xylella fastidiosa 9a5c, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a pathogenic strain (8.1b) isolated in 1992 in France that had come from infected twigs derived from the sweet orange strain Valencia in Brazil in the same year. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
250202725040992073hypothetical proteinBLASTP
25043412505210870heat shock protein HtpXQuickGO ontologyBLASTP
25058372505944108hypothetical protein
25062572506403147hypothetical protein
250692325081131191elongation factor TuQuickGO ontologyBLASTP
250822025103372118elongation factor EF-2QuickGO ontologyBLASTP
2510474251094146830S ribosomal protein S7QuickGO ontologyBLASTP
2510957251133137530S ribosomal protein S12QuickGO ontologyBLASTP
251158425158764293DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
251590625200724167DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
2520307252067536950S ribosomal protein L7L12QuickGO ontologyBLASTP
2520730252114641750S ribosomal protein L10QuickGO ontologyBLASTP
2521760252245869950S ribosomal protein L1QuickGO ontologyBLASTP
2522463252293947750S ribosomal protein L11QuickGO ontologyBLASTP
25230882523645558transcription antitermination protein NusGQuickGO ontologyBLASTP
25236592524066408translocaseQuickGO ontologyBLASTP