>NC_012785:1988527:1988527	two component transcriptional regulator, winged helix family
LKVLVVEDDEGLRRLLNLELTHYGYEVKTSGKGIDALRMYRDFCPDIVLLDILLPQLDGFELLVAFREIFPGAGIIILSVINDKESKLKAFRLGVDDYVTKPFDMEELLARIEALARRAFLHERVKNNERLSDISSRIEIDDKSRTLRSGEIEVRLSSLEFRIFKILYSNTGTVVEKDQIIAVLWGQERAPSESTIPVYIKYLREKLEPLKIKIETVRGVGYVLKVEG
>NC_012785:1988527:1989191	histidine kinase
MYSKLRANFWMTVISLIASLIVVLLAYATVYRVVIVSTSRNALIALKQIDRVYNEKILQTIPPKMFNRIPATVIILRNDEYKVIQDALGIGEQVEKILVLSAEKKIFDLNGEYFLKTQLKTTRGIIVAIQPANHIVELLKRTAGLFFIVWLIGAGVILFFSFLFSSRFIKSIGSIIKRAEKISREMEGLLPEEGLSGEMLELTKSLNKMILRLRNALEDEKAFSVSAAHELKTPLANIIGYVGMLRRWGLQHEDIAYESLERIERTAIELNDLVSKFLNLNEPIDLSKMLEIQASDFLNDYIDELKGRLPNRKIEVDCKADPFLKIPDGLLENILNILVDNANKFSPENLPIRIVVENNKIGVMSYGPKILEEYKEKIFEPFFRLDKEKKGHGLGLTIARRLARKAGWDVYLDISKEGNIFWIKFN
>NC_012785:1988527:1990464	protein of unknown function DUF52
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYSGPVAAHGYLELSKIGKPRKIIIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELVRNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPIIMTDQSINAVRTLVEAISSILKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPIAVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS
>NC_012785:1988527:1991297	type II and III secretion system protein
MKKSSLLLLFLFLIFFSILIHANQLKSLVPTLDDRSVTITMTFSSALNELDYNIQSNPSKTVYSLTLYGVSGKNMNLPLRAGPVEGLWTRDLGDRMSLSVALLIPANKEPEVLLKNNTLILRFWRSAIEVSVDRFSTYSMNLQTVLTYLFSDEVLNLSHVITEKVGKLPVTVGFTSSHPEDILRNILISLGSQIAYAYLTDGTFYIGTPEEVKDVVNRFWKTYIGVDIKVGEDGQNQLEAIRKALPVEAFLEYIPNESTLLAFGDLETHLLLSNLLTSSYIKKEYNVELLKLPSGEKTLDYFYKIASEVNNFLCDGSVKIDSLPEFNKLILSGSARDVNIIISYLDSYKKSLQKDLEQSKPKILTVKLPDNFKIVEDVINRNRTEKITLASLIESLLSNYIPGEQLQVDRTFESLGKITLTFPEAMTDIVNEILRDITLRSQTIGYRILRDTAPIDNEIIMQIEDLTGVIIESLGENNGYIIKGEKNKLDIAEYLISQFTEASHGKIARRFIEIKTADAFDSVKNFLEHFFATEGLKPEQYTIDAIAERLVFISAPEEALERALQELGKYEKVFFPETGEYFIEIPENVYESGIKDLISTLYTGKIDYTYIPSIEILIVRGNKNDLTSLQNLIKQMTPKIESHLGLKTSPIEERKISKLIKSLPGWDDEKFNTYLESYLGEEAYKRIKIIPTTGGYLVIGDETTVKVVENEIERLRELENPYYLIVERLPRIEQFNDLLLRMGITVEIFPVNSKYILAGTRDNVLQARNLINQIEMGIPAETTEGTTTSTIVFSFVDIPEDSIEAIQAIITKLGINVEIMKSPTGPLLIGTPNEVKRATEVIESVLSKRREEVEKTVNKGYAILPKLANLDLGTVKTIASSFSYNLNIIEAAGKVIVIGTQKDVEDFIPVYKELESDGEGKLLTLDKKVAYSELENVIKTLGFSVSIVETQHKIIVFGNPEDVAAIQRLVSELTPEDTEPATTDVLPLKKDIAVLTNVNIETDKLSALLNDMSINVKLYSFNNGLAIIGYPEEIQKAKEIVQHLSGLPSLKTNVYKYIETTEPMNQEFLRTAATSLDLQVTFLFIKENGIIVVGSREDVESMVEFINGLQSQIKEEEFSYALVSRPGIDITNLEQIFEGLGLNLTVHELPDSLVLIGSRADLKKAKSFLEQIQFSSQESAEGTKTTYSLINIPEGFTTTDIQTIVRKIGINVETIPAGTAALLVGEESAITDAKGVISTLSALGKKPAELVEYSYKIITLPIGVTPQELSTFFETIGLNLKTLEISGYVVLVGTDEDIAKGEEAIKALAPKETAEATPVKKEYTTISVPEGFTLESLQTVLRKIGIEVDITVAGDVVVMVGEAESLAKATEVITRLHGLNKRPQISKIEYAVLEAPIGLDLNTVKEALNALNVAAQILKTDDKLIVIGTSGEIEETKNMIELLKPEITEEATKVEEKTYTLVNLPEGLSIEQLQTITRKIGIKTELVGAANTVLVVGSKTEIQKAQNVIATLAKLSTKPEEMVKLSYKIEERETTLTVNELNELLKKVGIAAEGIEVSGKFVLIGPEEEITKAEEVLVAFEKDTPEATETRKVYELVNIPEGFTTTDIQTIVRKIGIDVETIPAGTAALLVGGESAITDAKGVISTLSALGKKPAELVEYSYKVFERPGQIALATLRELLTSVGLDVKAIEIGNSLVLIGTDSNISKAIELLDSLKVDSAETGHQELEYSIVELPENIDPDQLEKVLEVLQISARILQLGDFMIVTGDATNLADAERLIKKVVDSAQATETTVVSNELSYKLITLPPGSSLDELSLIAKTLELKLKIQPIGNQVLIAGDLNEIEYIQDIIEKTAVPEKPEGQRNVKLLQKLPGIDADTLKKYLLSKGIAVSDVFDVDNGYLIFGSDSAVEQAQQLTNYLADSTKRSYEFVEVPENISEELLNTLADSLMVDIGITKVSENTFLISGKTEQILKFKETLSGLYSLKTGTLAYRIIKKPGIQLQQLEEIFSGLDLRVKLLETEQNLVIIGKENDIERANKLIEELTTTYNTSAATETNIVISELPRLPGWTLEQITEYLKAADISLRSLFSYGDKVIGIGFSEQLERAKELLNFLVKDQKTEFTKIEKSLATAEQLKNVVDSMDVSVNIIELENAWLLIGNKNALDKIKGIIEGALTEEKDYQSYIYNVTNVSTELELFMEATFPQVETRVFKNLGVIVLKSKDQEALAKAEELIKQIQSKDVEISPEDNFMVKDGLIYVYAENANLIAVMKRIAKSLGISLMVPEELDETFTLTLEGVTWDTFVAAIQECEPVKVEKVNDIYIVRKKEIVSEAPTDDATGEQIYRVYHNIEELKTLIEFYGGTVYADSVNGILVVKGLPKSRVLELMEQVSGTFTSPKKQVKIETRIVDKSLLDDITKQFSTSLGFEQPNILFSSGSLNLSFSILDSVDFAKLLKNLITGSATITAQLEKSNVDGSIISNPSIVALSGEEARIHIGDTIPILLKKIDPATGNIVEELQYLETGVEMTITPTVKDDGTILLDLYIKVSEPQPYANDLYGEKTREAKTKLVISDGNTLTIGGLVSERENVSVTKLPFFGDLPFIGKLFRAEKTTKEQREMVIFITAKVVAP
>NC_012785:1988527:1999241	hypothetical protein
MLEKIAIFSIFFSLIGIFLLLSLLFIQPLAITEESVVYNKQEEIDLSLFEKNLKLENYFQPLFAKPEEVIQSLLEIGVEATSLAYKSYIKLNDVNYAVIEVNNQLKTVRVGDFIAPYIVYGITEFAVLLNDTRSNTFAIVKFFQAEN
>NC_012785:1988527:1999697	hypothetical protein
MKLINNGDNEINKGFMENFSEDAFFLGESLLGSGQNRELLFVSEKYKNRIKRKVTPLHRKGIPTRVAGILIILTTITAFLLFVGFYMFNAFRDVSRLTTEIEELEQTYYQVQKLSKVANETVAFLSSKSNFEELAKLLGISTNTKGKALEGIYIASSAEDTLKIMERLTNDPKVIMKKISIKSNLGFPILPKTDLPTNVVVELTLDLYVTDLF
>NC_012785:1988527:2000325	
LFTFFVVIGISLGIILMGKFILAKGFESRLNQIAYIKGYLLDSVGIILTGVPKIDASAISTKRNELVVEQAKLARRVSELKKHIRSKEKEILFFKTLEAFLEDQNAIRSIVTRLDYEGGTGVAYYYLIYDRDSKTTVPSPALKPSTPYQLNLKGEMEFSNLYTLKLYELKVGDEID
>NC_012785:1988527:2000857	hypothetical protein
LFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEVITTAIHPSNVVFQHVEVPKVKNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSVIPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKLPPREIFAGSRILFSVDLDYSILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYLSQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNVLALPLRMDASPQFSYNVAGLLVRGGEILGKRKLAFKEESL
>NC_012785:1988527:2001894	hypothetical protein
MNLTETVLYILLISLGMFLISFPIINFFGSYNIKLSKIQFDIFLEDVKQEAIQSSKRRKIFYNHTTGIFIVSTGGKFEDFPGTASQDCIFGFEDDGSFFIEKGSTTFSFEDGSSLVIMPVTGRVVY
>NC_012785:1988527:2002284	type II secretion system protein
MPEYRYEIITKDGKTERGKISAASQLEALQLLNSQGFVVTSIKPISKTRKRKRSLFPIQPKELSLFSRQLATMVSSGVRIRDALQVLSKQTMFSRRFRKILVEVVLLIESGEGFSDALEKTRVFDELFVNLVRAGETGGVLDEALQRVAEFYEGMVDLQNQVKSAMSYPLFMMAFAVGIVGVISFFILPNLMSAFGTGFEPGGVMGFLLWMNSLLTNHGVVVAIAVVMFFIGAKIFMMTKYGLIVKNFFGSIIPPVRKLRETTALERFTRTLAVLVASGVDLPTSLELAAEVSESTKIMNGISLAVDMIRAGEPIHVSLEKQKIFPSIVISMVSTGEETGKLDEVMFKVADFYHAQVTTSLKKLVSLVEPIMIMFIGGFIGFLAYTMYNTIFSMEQAMGG
>NC_012785:1988527:2003488	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
MYRVGIGFDAHPLEANKKGLYLGGVKVSEEYSSIGHSDGDALIHAIVDAILGATNAGNIGIWFPENEENRGRRSTEFLEIIRKKILAGKYEILNIDSVIIIDKVRMNPHIENIRLKLARILGISKGNINVKPKSGNTLYGNSVSVYAVCMLKKVGT
>NC_012785:1988527:2003959	DNA polymerase III, beta subunit
MRFSIPRNEFLTRLESVSTAVASKTVKPILSGILFRTAEDSKLELIATDLETSIKTYVQPSEISGTGQFVVDAKVLLEIMRNLPDGKVFFEFQDTNLVIRMEKSRFVLPTMSGEEFPEVEPAQGGWELETSVTALEIMIDRVLFCAAKDEFMRNLNGVYWELEGGYLRLVAADGFRLALAEEKTNQNLEDHFLLTLKSMKDLQSSIKTAGSDDMKIVYDGTRVGFYFDGTEMVARVVEADFPDYKKVLPKAFKTRVVANTSSLSDAIRRASIAARLGSDSIKIEIKEDNMKLIAKSPDHGESSEELEIKKDGEDLIIAFNPKFLLEATKKIDTEEVELNFVDSNSPLQMNPVDVEGYLYIIMPIRLI
>NC_012785:1988527:2005152	Deoxyribonuclease V
MKIRCLHDWNVSLEEAADIQRTLKGMLSFEFPAKKVSIVAGVDVSFPQKNLGLCVIVVMDDTLKVIESVYHTQEVHIPYVSGFLSFREGPIFIETVKKLKIVPDLFFFDGQGIAHPRGLGIAAHMGLLLEKPSLGVAKSHLFGSYNEPGRNKGDFSYMYNKTGEIIGTVLRTKKNTKPVFVSPGHMMDVDTAMSLTLKYTGKYRLPEPTRQAHILTQRLRKNHLLR
>NC_012785:1988527:2005817	ROK family protein
MGLVIGIDLGGTETKIGLVDEHGKILNKTTIPTLVSRGREDVVARIANSIHNILDIANEKDKVLAIGIGSPGSIDRDSGKVLFSPNFPDWRDFPLASMIRKHTGLETFIENDANAFILGEWAFGKYKGSKHMIGLTIGTGIGSGVISHGQLITGHNGYAVELGHIIVEPNGPLCGCGSHGCLEAVASATAIVRFAHEYRKRFPDSAIFSSEKIEAKTVIDAAKSGDELGKIIFDRFIDALARGIGGFIHTFNPEVVIVGGGVSKAGDFLLKNLRERVDRYVMTSFKGTAKVDLSDLVEDAGIKGAASIVFYRKR
>NC_012785:1988527:2006775	transcription termination factor Rho
VSSSEQNHSEKVNKTPETSANKDSSTTDKTDNEKDQNNKVKDTIREVEIDISQLLKMPIRELYKLARKYSITGYTQMAKKDLIFAVLKAQTESYGYFFAEGVLEITDGGYGFLRTLDNNLLPSSNDIYVSQSQIRRFNLNTGDWVAGQVRSPKEGEKYFALLRIEAINQKPVSYAEERISFQNLVPVYPDEKFILETEPYIVSTRIIDLFSPIGKGQRGLIVAPPKAGKTTLLKEIANGIAENHPNTIRIILLIDERPEEVTDLRRSTDAHVIAAPFDMSPDKQIRVAELTLEMAKRLVEFGYDVVILLDSITRLARAYNLYVPPSGKLLSGGVDPSALYHPKHFFGAARNIEDGGSLTIISTALVETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFPAINLNLSGTRKEELLLPPEILRKVWVLRRMLAGISEEEGLKVIVDKMKTTKSNEEFLDLIDLEKSRY