>NC_011750:3545466:3545466	tRNA-Phe
ARIAQSVEQGIENPRVLGSIPSPGT
>NC_011750:3545466:3545739	Prophage integrase
MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREECISPFEYAKVNNPLKR
>NC_011750:3545466:3547230	SHI-2 pathogenicity island protein
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQENDFIDVHAHLAYVFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPDNRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNHGARWLLGPELLRTGAHEQARHILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVWHNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDETLSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ
>NC_011750:3545466:3548833	IS1 repressor protein InsA
VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR
>NC_011750:3545466:3549027	IS1 transposase InsAB'
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMGEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>NC_011750:3545466:3549997	putative HTH-type transcriptional regulator
MRACTQTVCFSNMENNEMNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTLFAAENHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAHFSDASS
>NC_011750:3545466:3550715	hypothetical protein
LVCRALRNALETRSRDGRLLFHSDQGVQYKSNKYRKLLWRYGVMQSMSCRGNGLDNSPMERVFRSLKNEWLPKGGYGDFIHAVRDINQWINGYYNVYRPHTNNDGLPPCLHEEKWKQVIPVS
>NC_011750:3545466:3551553	putative transposase ORF A, IS3 family
VVKYQRDVREVALALELNPDHLRKWIRLYKQEFQGIESAGNAIIPEQREIQQLKAQIKRVEMEKEILKQAAVLMSEIPGKLSR
>NC_011750:3545466:3552009	
MGYLDKRWGRVCAPVGNTKQLSNTFNELRFSLLLPADLPKGRYEVPIKYIRGIQHHYYNGWREHYKMPYSQVKQLPATNTLMLSFNNTGSCRPSAQSLEINHGNLSIDSAHGNYASQAVTIYCDVPVTVKISLFSNTQPAYNNQGVAVGLGNGWDSIIYLDGVKRNEETLRWNTAGSRTVTVGSKLYGEAGKITSGALSGSMTMIMHLP
>NC_011750:3545466:3552571	
MKKWFPAFLFLSLSGCNDALAGWHNVMFYAFNDYSGYDSGNMTIFDRGQFTIPWKTGAASAIYSSCQTPEFVSGVYFQEYIAWVLVPRSAQPTDGYTVFLMSTVNMAGIRKIQVIMGIIISSTDMNGILGQAMGAGVCSGRKYKTIE
>NC_011750:3545466:3553058	fimbrial adapter PapF
MFSVPLSGGGMIRLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGEVTKTISISCPYKSGSLWIKVTGNTMGGGQNNVLATNITHFGIALYQGKGMSTPLTLGNGSGNGYRVTAGLDTARSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
>NC_011750:3545466:3553636	fimbrial tip protein PapE
LYRIFQMKKIRGLCLPVMLGAVLMSQHVHAADNLTFKGKLIIPACTVQNAEVNRGDIEIQKLVQSGGNQKDFTVQMTCPYHLGTMKVTITATNTYNNAILVQNTSNTSSDGLLVYLYSSNAGNIGTAITLGTPFTPGKITGNNADRTISLHAKLGYKGNMQSLKAGDFSATATLVASYS
>NC_011750:3545466:3554212	IS1 transposase InsAB'
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMGEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>NC_011750:3545466:3554634	IS1 repressor protein InsA
VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR
>NC_011750:3545466:3554938	
VKLAFSGPRVSGHNEELDTSGGTGTAIVVQAAGKNVSFDGTEGDANTLKDGDNVLHYTAIVKKSSANNAQVTEGAFSAVATGDAANLLI
>NC_011750:3545466:3555204	
VCSVMKKRLLFMIKSVIAGAVAMAVVSFGVNAALTTPQGQGRVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLQAGGVSKPMNLDIELVNCDITSFKGGEESRQQKKGL
>NC_011750:3545466:3555714	
MKDYLVGGHSRKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD
>NC_011750:3545466:3556432	pap operon regulatory protein PapI
MSEYMKNEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLLKGEKQAGQSCSSTT
>NC_011750:3545466:3556811	transposase ORF B (fragment), IS629
VAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA
>NC_011750:3545466:3557284	Intron_gpII
ESRMR*KVHVRFGEERQGNSPTTPCLLL
>NC_011750:3545466:3557374	Group II intron-encoded reverse transcriptase/maturase
LIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIRKRSRYGEMRVVSTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQFVDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI
>NC_011750:3545466:3559489	transposase ORF B (fragment), IS629
VYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKTVATGDRVNRQFVAERPDQLWVADFTYGVPGVQGGHGCLNEPRVCLEY
>NC_011750:3545466:3559945	
MLSREDFYMIKQMRQQGAYIVDIATQIGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRFETQPGYQLQHDWGEVRGGGCRATVQS
>NC_011750:3545466:3560150	
MSGIVRLSLRRLRQWVIRADVPCCVTTSSPNVKCVRQKEQFASKLSLDTSSSTTGAKLEVEVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGCVKTVLVDNQKAAVLKNNNGKVVFNSGFLLLADHYNFLPRACRPRRARTKGKVERMVKYLKENFFVRYRRFDSFTHVNQQLEQWIADVADKRELRQFKETPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSRDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRIYSNEKLVASHRLCSASSGWQTVPEHHAPLWQQVSQVEHRPLSAYEELL
>NC_011750:3545466:3561115	transposase IstB, IS21
VMHELEVLLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERSENVILLGPPGVGKTHLAIALGVKAVDAGHRVLFMPLDRLIATLMKAKQENRLERQLQQLSYARVLILDEIGYLPMNREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDHVLATAILDRLLHHSTTLNIKGESYRLKEKRKAGVLTKNTTPISDDEMVKSGQHQ
>NC_011750:3545466:3561955	transposase ORF B (fragment), IS629
MPLLDKLREQYGVGPVCSEQHIAPSTYYHCQQQRHHPDKRSARCQRHDV
>NC_011750:3545466:3562104	transposase ORF A, IS629
MTKNTRFSPEVRQRAVRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK