>NC_004757:1021355:1021050	Integrase, catalytic core
MNRTLKEATVKRYHYENHQQLREHLYSFLNAYNFARRLKTLRGLTPYEYIIKCWQNEPERFIINPYHHKVGLNSYSVFRCLDTVRLSAAHVGFFTEMREISC
>NC_004757:1021355:1021355	Integrase, catalytic core
MGQILHGSARTTAAVRRAIQHSEESLNVLARRYAINPKTVAKWKKRNFTHDARMGPKEPRSTVLTPEQEAACVAFRKHTLLPLDDCLYALQSSIPTLTRSSLHRLFQRHNISRLPEVEGEKPARKKFAQYPIGYFHIDIAEVRTEEGKLYLFVAIDRTSKFAYAELLPKYGKMEAAQFLRNLIAAVPYKIHTILTDNGIQFTHRKTDRHAFLHIFDRVCLENGTEHRLTQPNHPGPMVKSNA
>NC_004757:1021355:1022005	
MNISIPFTIVNPYQYTKLSLVLACAFGVSLQPVFAQDLVTPATDDNNAGSPPTMLEPVKIIANPENPQSSMGSAYVLSAEELNKFKHTNINQVLRGVPGVYVREEDGLGMFPRIGVRASSAGRSDRISVLEDGIPAAMSPYSNPSAYYFPNVGRISSIEILKGPEVLMHGPHTTSGAVNVISTPIPDKLTGAVNVEVGAFRTRKIHAHYGGTFDAAAFGQFGFLLETYQGKSNGFHDIDRSKHTAGYDINEYIGKARWKSAPGARFAQQLDVKLHYDDERLDVSCLVPHCDGVLYDLLPTQEELWDRYYTGAPARQRRCVERYNIVKRA
>NC_004757:1021355:1023190	possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding
MNTHSLVPNYGISARQCYEPIRVLIVDDHIDLISNVFAYLENKNFILDAARDGESALELSSNGQYDVLILDWMLPRLNGLQVLQRLRAADVDTPTLILTAKSDIPDKLSGFAAGADDYLTKPFLIAELEARILALHTRRIGRAKILRVGSLIYHLTSQQVMRDGSIIHLHSGSRKLLQVLMRESPNVVTKDRLESLLWGEDRPDRDLLRTHIYELRKSIDGDYPLKFVQTVPKVGYRIVDPELGP
>NC_004757:1021355:1023924	hypothetical protein
MINRSRLRRLIVISLVSYTVVLSLTVSLHGYLVNEYIEELIWESMLESEMAYIKRKIAQDPEYDWSGLDRFHWYDEHRDSSIPPQFQALPAGMHDEVRIDGSEFAILIEDGPEGRKILALDITDLENRELMIAFAIVASTVLLITVLTLLSFYSVDRLLRPLTRMADEISNLSPDGEGPKIPIGDKDAYV
>NC_004757:1021355:1024553	Integrase, catalytic core
MSSVHHKIIKHKIGLLNLAAELGNVSRACKVMGFSRDTFYRYQAAVETGGVEALIDANRRKPNIKNRVEEATEAAILAFALEQPAFGQVRVSNELRKRGIFVSPSGVCSVWLRQNLESFKKRLSALEKHIAETGAVLTEAQVQALEKKQEDDVAQGEIETAHPGYLGSQDTFYVGTLKGVGRIYQQTFVDTYSKWAAAKLYTNKTPITSADMLNDRVLPFFAEQSMGIIRILTDRGTEYCGKPENHDYQLYLALNDIEHSKTKANHPQTNGICERFHKTILQEFYQVTFRRKIYQSIEELQHDLDDWMAYYNSVRTHQGKMCCGRTPMQTLIDAKEIWDDKITELNN
>NC_004757:1021355:1025874	putative DNA transport competence protein, ComEA
VYYIWPKRLKLRNPEALFLNFCGDSEMKKIFLILVIFFGFNLSVLAGVDINTASQADLESVKGLGPVKAKAIIEYRNKYGMFKSVEELANVKGIGAGILKQLGDQVSVQEGAVLTETKVD
>NC_004757:1021355:1026940	hypothetical protein
MTSIKWLGGVLLGMVCSIQVQAHGGLSLAEDMCKLTIGPYTMHFTGYQPESTQEKEFCEDIPNIGRTIVALDYIDEALRTMTTEVRIIRDTGAEPGSEGNLDELTVFHSPPKVYMNGSVTFEHDFPAEGKFVGLVTIRDNGTEHISRFPFAVGTGGKPDMLYILGALALAAGAGIFFFKKKQNL
>NC_004757:1021355:1027579	possible (U92432) ORF4 [Nitrosospira sp. NpAV]
MRRESLLKKHEGVVKSTGGGVVLKQSLYSIVTAFVFVILCSASTVWGHGRVSLEEDNCVRQVGENMVHLNTYQPQYDQAGHYCTEIPAAGDTYLVVDLIDPALRNMPVSMKVFRGEEKGGEAILQVKADYHPDGVINGIGKLDKGLYSVMVTAEGVPPLNYYYQLRVEMVDYGKLVRTWAGPAVAILFLGWLMYKLVQSGRLRSWFKSQDD
>NC_004757:1021355:1028378	ammonia monooxygenase, 43 kDa subunit
MGIKNLYKRGVMGLYGVAYAVAALAMTVTLDVSTVAAHGERSQEPFLRMRTVQWYDIKWGPEVTKVNENAKITGKFHLAEDWPRAAAQPDFSFFNVGSPSPVFVRLSTKINGHPWFISGPLQIGRDYEFEVNLRARIPGRHHMHAMLNVKDAGPIAGPGAWMNITGSWDDFTNPLKLLTGETIDSETFNLSNGIFWHVVWMSIGIFWIGVFTARPMFLPRSRVLLAYGDDLLMDPMDKKITWVLAILTLALVWGGYRYTENKHPYTVPIQAGQSKVAALPVAPNPVSIVITDANYDVPGRALRVTMEVTNNGDIPVTFGEFTTAGIRFINSTGRKYLDPQYPRELIAVGLNFDDESAIQPGQTKELKMEAKDALWEIQRLMALLGDPESRFGGLLMSWDAEGNRHINSIAGPVIPVFTKL
>NC_004757:1021355:1029642	Ammonia monooxygenase
VSIFRTEEILKAAKMPPEAVHMSRLIDAVYFPILIILLVGTYHMHFMLLAGDWDFWMDWKDRQWWPVVTPIVGITYCSAIMYYLWVNYRQPFGATLCVVCLLIGEWLTRYWGFYWWSHYPINFVTPGIMLPGALMLDFTLYLTRNWLVTALVGGGFFGLLFYPGNWPIFGPTHLPIVVEGTLLSMADYMGHLYVRTGTPEYVRHIEQGSLRTFGGHTTVIAAFFSAFVSMLMFTVWWYLGKVYCTAFFYVKGKRGRIVHRNDVTAFGEEGFPEGIK
>NC_004757:1021355:1030636	ammonia monooxygenase subunit C2
MATTLGTSSASSVSSRGYDMSLWYDSKFYKFGMITMLLVAIFWVWYQRYFAYSHGMDSMEPEFDRVWMGLWRVHMAIMPLFALVTWGWILKTRDTKEQLDNLDPKLEIKRYFYYMMWLGVYIFGVYWGGSFFTEQDASWHQVIIRDTSFTPSHVVVFYGSFPMYIVCGVATYLYAMTRLPLFSRGISFPLVMAIAGPLMILPNVGLNEWGHAFWFMEELFSAPLHWGFVVLGWAGLFQGGVAAQIITRYSNLTDVVWNNQSKEILNNRIVA
>NC_004757:1021355:1031893	SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family
MLQTDNLIPDFINKQITQAVMSLRSGNVVAFPTETVYGLGADISQPQAIQKIFEIKGRPSSHPLIVHFANLSELEFWAENIPATAWILAQHFWPGPLTLILTKSNHIPLSVTGGQETVGLRIPRHPIALKLLEQLGSCKALAAPSANRFGFVSPTIADHVKNAFNDKIEVILDGGPCEVGLESTIVSCIDKDVTILRPGGISVLSIENLLQQKVSVKSQNKIRTPGSLSSHYATATPLEICQSSESLFSRSFDLLQQGIRTAVIIRSIHLIPMLNSDDKFHYILMPNDPVAFGKDLYATLRKLDDANFERILVEAPPDDLEWLAVADRLSRASYSFTSK
>NC_004757:1021355:1032928	hydrolase family
MALSAVLFDVDGTLADTERDGHRIAFNQAFNEFQLDWEWDVDLYGVLLQITGGKERIRFYIENYAPSLLSKNNLDEWIAQIHKTKTNYFLNLLKEGKIPLRPGIKRLLDELRKNNIKIAIATTTTYENVSTLLQCTLGDSALEWFDVIGAGDIVSKKKPAPDIYEWVLNQLNLPAEACIAIEDSENGLKSATAAGIKTIITISEYTREQNFSYAALVLEDLESTDHTHQIAAQSFDKPLSVQTLSDLLN
>NC_004757:1021355:1033717	LysM motif:Peptidase family M23/M37
MFMRLFSFFLLTLSLGACVSKPDPAPVVERLPGSYSGISGDNVKDYERKEVYVVQSGDTLYGIALKNGLDVNQLAEMNDIADPRELRVGQKLYLRTLAGQGQIPDQEDLSSQPTLFSISQPGDVGVAGYQPGTLSDGSNYETTESFKTEPKGVLLPYSDTARDQLNNQSGAAQVDSEPYHQVSSIKEPSKNKSDQSANVRTNNSSINWGWPTSGQIISQFSEKSKGVGIGGQLKQAVLASASGTVVYSGSGLRGYGNLIIIKHNDSYLSAYGHNSKIFVHEGDSVSKGQKIAEMGNTDGGVVKLHFEIREKGKPVDPLGYLPTR
>NC_004757:1021355:1034799	pimt: protein-L-isoaspartate O-methyltransferase
VSVRHSGIGMTSLRTRVRMVERLREQGIKDEVVLAAMGFIPRHLFVEAALASRAYEDVALPINYGQTISSPWIVGRMTELLRNGGSNSLRKILEIGTGCGYQTAVLAKIASEVYSIERIGPLLTRTRIRLRELGILNIHLKHADGMRGLPEAGLFDGIMMTAVIPEIPETLLEQLAMGGRMVFPKGNRKQYLCVIDHTTEGFVETILDEVMFVPILPGTINR
>NC_004757:1021355:1035582	acid phosphatase
MRILLSNDDGYFAPGIANLAKVLLEIADVTVVAPERDRSGASNSLTLDRPLSLHKSHNGFYYVNGTPTDCVHLAVTGMLDELPDMVISGINDGANMGDDTVYSGTVAAATEGFLLGLPSIAVSLVSMSRGNFPTAARIVVDLVKRFTENRFHIPILLNVNVPDVPYDELQGVEVTRLGRRHKAESVIKYQTPRGETVYWVGAAGAAQDAGEGTDFFALQNNRVSITPLQIDLTRYDQIGYVKNWLTL
>NC_004757:1021355:1036497	tRNA-Pro
RGVAQPGSVLAWGASGRRFKSSRPD
>NC_004757:1021355:1036708	Bacterial regulatory proteins, MerR family
VENQAQINVLPPIPVKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRSIRRHGNRRYYQHQEVILIRRIRELLYDYGFTINGARNHLVLGLQNQVKNNVVGGQSCQSGSDFSLAGLKREIEQVISFLQVSE
>NC_004757:1021355:1037078	integration host factor alpha subunit
MALTKAELTDLLFENIGLNKREAKEIVECFYEEMRAALQNGDGVKLSGFGNFQLRTKPQRPGRNPKTGEEIPISARRVVTFHASQKLKSMVEANYRGESGTN
>NC_004757:1021355:1037437	pheT; phenylalanyl-tRNA synthetase beta chain protein
MKFSGNWLRKLVDLQYSDEELAHKLTMAGLEVESVAPVAPFFDKVVVAQVVSVQKHANADRLNVCKVDVGTQSDGFLQIVCGAQNVKEGMKTVCALVGARLPELDIRQGKIRGVESLGMLCSAKELGLASDADGLLELPGDTPVGVDFRKYYSLDDCIFTLKLTPNRADCLGMFGIAREVAAITASELDLPEIVFVNPVIEDVLQIRVEEPESCPLYCGRVIKGVATDTAIPLWMSQRLERAGLRMINPVVDIINYAMLETGQPMHAFDLNQINQEICVRFAGENEHLLLLNGERLTLQKDMLVIADSSKPLALAGIMGGSESGVTNTTIDVFLESAFFSPVVISGKSFKLGFTSDSAHRFERGVDFSMTRSVLERATALILEICGGKAGPVTEIGNDLPRREAVRVRQKRIAKILGVDFSVELISEYFQRLQFSYTIAGEMFYVVPPAARFDLVIEEDFIEEIARVHGYDLIPARLPKAPVHMLAEPETGVSPVKRLRQILTAKDYQEVINYTFVDTQWEADFSGNDIPIRLKNPIASHMDVMRSSLFGGLIDNLQFNLNRKQSRVRIFELGSCFSKEGDEEKEVENLAALCSGSAYPEQWGVPDRDIDFYDVKMDIESLFWPRSVYFELALHPALHPGKSARILIDKKPVGWIGELHPRWQSKYHLSQSAILFELRTEALAAELLPAMYPLSKFPPVRRDIAVVVESDVSVASLLETMHLEKDRSISEISLFDLYSGEKLVQGKKSLAFRILLQDSEKTLTDQEIDRAVSQLVGILERKFGATLRS
>NC_004757:1021355:1039822	pheS; phenylalanyl-tRNA synthetase, alpha-subunit
MNHSIAMGNLEDLVNAAIKLFDNAESIVDLEQIKAQYLGKTGEITILLKGLRELTPEERPVMGERINQAKKLLEDALIERRNLIQEKNMSARLAEESLDVSLPGRGLGMGGVHPVTRTLIRIESLFHSIGFGVATGPEIETDFYNFTALNIAENHPARAMHDTFYVDGGKLLRTHTSPVQIHYMQNHRPPIKIIAPGRVYRCDSDVTHTPMFHQVEGLWIDENVSFSALKGVLVEFMRNFFEKDNLSVRFRPSFFPFTEPSAEMDIACVMCNGKGCRVCGETGWLEVLGCGMVHPNVMNHVGLDSEEHIGFAFGLGVERLAMLRYGVNDLRLFFENDLRFLKQFN
>NC_004757:1021355:1040928	50S ribosomal protein L20
MPRVKRGVTAKARHKKILKLAKGYRGRRKNVYRIAKQAVMKAGQYAYRDRRQRKRQFRTLWIARINAAARELGMTYSTFMNGIRKAGISLDRKILADLAVFDKVAFEKITNQVKAGLAN
>NC_004757:1021355:1041299	50S ribosomal protein L35
MPKMKTKKSAAKRFKVRAGGSIKRSQAFKRHILTKKTTKNKRQLRGVAAVHASDMVSVRVMLPYA
>NC_004757:1021355:1041621	Initiation factor 3
VSIAEAKEMAEEAGVDLVEIAPGAEPPVCRLMDYGKYLYQESKKKHDAKLRQKQIQVKEIKFRPNTDEGDYGIKLRNLIHFLNDGDKVKITLRFRGREMAHQEFGVRLLERVRGDLADHAVVEQFPKLEGRQMVMVLSPKKKEVKVGKSAKQSETDAKSEAITQ
>NC_004757:1021355:1042241	thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
VTVVRLPDGTDRVFDNSVTVREVAESISPGLARAALAGKLNGKLVDLSEQIETDSDLVLITDKDSEGLEIIRHSCAHLLAHAVKELFPGTQVTIGPVIENGFYYDFSYERPFTPEDLVAIEKRMQEISKRALKIERKVWDRSRAINFFKDIGEHYKAQIIESIPDNEPVSLYSQGDFTDLCRGPHVPYTSKIKVFKLMKIAGAYWRGDSKNEMLQRIYGTAWVSNEEQNNYLRCLEEAEKRDHRKLGKQLDLFHTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQVLDRSLWESSGHWENFRENMFITESENRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQILGEVTKFIDLLNQVYINFGFSETLIKLSTRPLKRVGTEDQWDKAETALATALNQKELNWEVQPGEGAFYGPKIEFTLKDSLGRKWQCGTLQLDFSMPARLGAGYIAEDNTRKIPVMLHRAILGSMERFIGILIEHHAGALPLWLSPEQVIILNISRNQAEYAQLITDELKQSGIRASSDLRNEKISYKIREHSMQKIPYLMVVGDKEMENRTVTVRGRAGQDYGAMSVESFVVRAQEEIAKRL
>NC_004757:1021355:1044459	putative tetraheme c-cytochrome
MTRLQKGSIGTLLTGALLGIVLVAVVFGGEAALSTEEFCTSCHSMTYPQAELKQSTHYGALGVNPGCKDCHIPQGIENFHLAVATHAIDGARELYLELVNDYSTLEKFNERRLEMAHDARMNLKKWDSITCRTCHKKPAPPGESAQAEHKKMETEGATCIDCHQNLVHEEVPMTDLNASIAQGKLVLKPEDDGDDEEADEDEDEETEEADDSSDSESASSSDNSDNEDDNNDE
>NC_004757:1021355:1045163	Cytochrome c-554 precursor
MKIMIACGLVAAALFTLTSGQSLAADAPFEGRKKCSSCHKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQDKDCVGCHVDGFGQKGGYTIESPKPMLTGVGCESCHGPGRNFRGDHRKSGQAFEKSGKKTPRKDLAKKGQDFHFEERCSACHLNYEGSPWKGAKAPYTPFTPEVDAKYTFKFDEMVKEVKAMHEHYKLEGVFEGEPKFKFHDEFQASAKPAKKGK
>NC_004757:1021355:1045926	hypothetical protein
LTALTTDRRAQTRWSGRLLPSLGILLVTGGLVLLTWYTWLVLTPDTAPYRYQQVTTGNASEYPELELDTWPDLTISQYDIHVEGTEQPVAQAWFGQRANQPQVLLNWKNQTREPLLALDQKASELSALAAAIDKHASRDALLLGWWDTSRQLALLTGRDVLFHTPLHEPLIIPPEWQPHEQAIRAYENQQAGTPADPQEQELFMRFAQSLVNPPANGLDDLRQLAGTRDTYLIVHVSDLYKLGLMYPDKFGIAYKHYRMTGNLHGMISHLKTEMRTRGYYTYTLQSLSDELIRAFFLIDEASYDTLLAKLLPFTSQPSPVERTSPRLIYQQGGYWVYHLTAKAPAHNTLQSGKDSNETTDSTVSVDQVQ
>NC_004757:1021355:1047032	hydroxylamine oxidoreductase
MRIGEWMRGLLLCAGLMMCGVVHADISTVPDETYDALKLDRGKATPKETYEALVKRYKDPAHGAGKGTMGDYWEPIAISIYMDPNTFYKPPVSPKEVAERKDCVECHSDETPVWVRAWKRSTHANLDKIRNLKSDDPLYYKKGKLEEVENNLRSMGKLGEKETLKEVGCIDCHVDVNKKDKADHTKDIRMPTADTCGTCHLREFAERESERDTMVWPNGQWPAGRPSHALDYTANIETTVWAAMPQREVAEGCTMCHTNQNKCDNCHTRHEFSAAESRKPEACATCHSGVDHNNWEAYTMSKHGKLAEMNRDKWNWEVRLKDAFSKGGQNAPTCAACHMEYEGEYTHNITRKTRWANYPFVPGIAENITSDWSEARLDSWVLTCTQCHSERFARSYLDLMDKGTLEGLAKYQEANAIVHKMYEDGTLTGQKTNRPNPPEPEKPGFGIFTQLFWSKGNNPASLELKVLEMAENNLAKMHVGLAHVNPGGWTYTEGWGPMNRAYVEIQDEYTKMQELSALQARVNKLEGKQTSLLDLKGTGEKISLGGLGGGMLLAGALALIGWRKRKQTRA
>NC_004757:1021355:1049051	trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
MNKSRVVVGMSGGVDSSVAALLLKQQGYDVTGLFMKNWEEDDTDEYCSSRQDFLDAASVADILDIPLEVVNFSTEYRERVFNLFLKEYQAGRTPNPDVLCNSEIKFRAFLDHALNLGADWIATGHYAQVHETDGLFQLLKGEDGNKDQSYFLYRLNQQQLSHTIFPIGHLYKREVRKIAREHRLPNSTKKDSTGICFIGERPFREFLNRYLPANPGEIHTLDDQVVGEHLGVMYYTIGQRQGLGIGGTRQGSEQPWFVSGKDIKKNVLYVVQGHDHPALLRSSLTAADLSWISGTPPHQNWVYAAKIRYRQTDAPCAITHFEHDSCQIGFAAPQWGITPGQSVVVYESKVCLGGGVIIGSND
>NC_004757:1021355:1050142	Bacterial type II secretion system protein E
MEKEQALKFMHDLLRLMLSKKASDLFITAGYPPAMKIDGKMTPVTQQLLSSAHTAALARAIMNDKQAVEFESSKECNFAIHPEGIGRFRVNTFVQQQRTGIVLRTITTKIPNFDDLGLPQVLKEVVMSKRGLVIFVGGTGSGKSTSMAALIGHRNQNSHGHIITIEDPVEFVHEHINCVVTQREVGVDTESWEAALKNTLRQAPDVILIGEIRDRETMEHAIAFAETGHLCMGTLHANSANQALDRIINFFPEERRAQLLMDLSLNMRALVAQRLIPKKSGSGRAAAIEVMLNSPLISDLIFKGNVHEIKEIMKKSSELGMQTFDMALFELYENGTISYEDALRNADSMNELRLQIKLHGSEARKISAETNIEHLTIT
>NC_004757:1021355:1051295	pilT; twitching mobility protein transport fimbria
MNIVELLSFVVKNNASDLHLSAGMPPMIRVHGEIRRINLPALEHKDVHDMVYDIMNDSQRKHYEEHLECDFSFAIPDLARFRVNAFNTQRGAASVLRTIPSRVLTLEELKAPKIFAEIAQQPRGVVLVTGPTGSGKSTTLAAMVNDINENQYGHILTLEDPIEFVHESKKCLINQREVGRDTHSFSNALRAALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRIIDVFPAEEKEMVRAMLSESLRAVISQALLKTKDGKGRVAAHEIMIGTPAIRNLIREGKVAQMYSAIQTGQGVGMQTLDQNLTDLVKRGVISAVEARTKAMNKDNFRG