Cluster: 1
Number of Islands: 9260
Domain
| Domain | # of Hosts | # of Hosts as Percentage of Cluster |
|---|
| Archaea | 341 | 3.68 % |
| Bacteria | 8919 | 96.32 % |
Phylum
| Phylum | # of Hosts | # of Hosts as Percentage of Cluster |
|---|
| Acidobacteria | 118 | 1.27 % |
| Actinobacteria | 2957 | 31.93 % |
| Bacteroidetes | 53 | 0.57 % |
| Chlorobi | 34 | 0.37 % |
| Chloroflexi | 66 | 0.71 % |
| Chrysiogenetes | 14 | 0.15 % |
| Cyanobacteria | 195 | 2.11 % |
| Deinococcus-Thermus | 148 | 1.60 % |
| Euryarchaeota | 324 | 3.50 % |
| Firmicutes | 130 | 1.40 % |
| Gemmatimonadetes | 8 | 0.09 % |
| Nitrospirae | 23 | 0.25 % |
| Planctomycetes | 68 | 0.73 % |
| Proteobacteria | 5067 | 54.72 % |
| Spirochaetes | 3 | 0.03 % |
| Synergistetes | 2 | 0.02 % |
| Thermobaculum | 9 | 0.10 % |
| unclassified Archaea | 17 | 0.18 % |
| Verrucomicrobia | 24 | 0.26 % |
Order
| Order | # of Hosts | # of Hosts as Percentage of Cluster |
|---|
| Acidimicrobiales | 6 | 0.06 % |
| Acidithiobacillales | 59 | 0.64 % |
| Acidobacteriales | 78 | 0.84 % |
| Actinomycetales | 2662 | 28.75 % |
| Aeromonadales | 59 | 0.64 % |
| Alteromonadales | 93 | 1.00 % |
| Anaerolineales | 6 | 0.06 % |
| Bacillales | 63 | 0.68 % |
| Bacteroidetes Order II | 49 | 0.53 % |
| Bdellovibrionales | 1 | 0.01 % |
| Bifidobacteriales | 197 | 2.13 % |
| Burkholderiales | 1417 | 15.30 % |
| Caldilineales | 10 | 0.11 % |
| Cardiobacteriales | 1 | 0.01 % |
| Caulobacterales | 43 | 0.46 % |
| Chlorobiales | 34 | 0.37 % |
| Chloroflexales | 34 | 0.37 % |
| Chromatiales | 144 | 1.56 % |
| Chroococcales | 146 | 1.58 % |
| Chrysiogenales | 14 | 0.15 % |
| Clostridiales | 51 | 0.55 % |
| Coriobacteriales | 72 | 0.78 % |
| Cytophagales | 4 | 0.04 % |
| Deinococcales | 94 | 1.02 % |
| Desulfarculales | 8 | 0.09 % |
| Desulfobacterales | 31 | 0.33 % |
| Desulfovibrionales | 115 | 1.24 % |
| Desulfuromonadales | 103 | 1.11 % |
| Enterobacteriales | 26 | 0.28 % |
| Gallionellales | 15 | 0.16 % |
| Gemmatimonadales | 8 | 0.09 % |
| Gloeobacterales | 23 | 0.25 % |
| Halobacteriales | 300 | 3.24 % |
| Hydrogenophilales | 11 | 0.12 % |
| Magnetococcales | 14 | 0.15 % |
| Methanomicrobiales | 10 | 0.11 % |
| Methanopyrales | 14 | 0.15 % |
| Methylococcales | 8 | 0.09 % |
| Methylophilales | 14 | 0.15 % |
| Myxococcales | 365 | 3.94 % |
| Neisseriales | 55 | 0.59 % |
| Nitrosomonadales | 16 | 0.17 % |
| Nitrospirales | 23 | 0.25 % |
| Nostocales | 4 | 0.04 % |
| Oceanospirillales | 74 | 0.80 % |
| Opitutales | 13 | 0.14 % |
| Parvularculales | 8 | 0.09 % |
| Phycisphaerales | 16 | 0.17 % |
| Planctomycetales | 52 | 0.56 % |
| Prochlorales | 22 | 0.24 % |
| Pseudomonadales | 636 | 6.87 % |
| Puniceicoccales | 11 | 0.12 % |
| Rhizobiales | 844 | 9.11 % |
| Rhodobacterales | 166 | 1.79 % |
| Rhodocyclales | 83 | 0.90 % |
| Rhodospirillales | 209 | 2.26 % |
| Rubrobacterales | 13 | 0.14 % |
| Selenomonadales | 13 | 0.14 % |
| Solibacterales | 22 | 0.24 % |
| Solirubrobacterales | 7 | 0.08 % |
| Sphaerobacterales | 8 | 0.09 % |
| Sphingomonadales | 82 | 0.89 % |
| Spirochaetales | 3 | 0.03 % |
| Synergistales | 2 | 0.02 % |
| Syntrophobacterales | 14 | 0.15 % |
| Thermales | 54 | 0.58 % |
| Thermoanaerobacterales | 3 | 0.03 % |
| Thermomicrobiales | 8 | 0.09 % |
| Unclassified | 86 | 0.93 % |
| Vibrionales | 3 | 0.03 % |
| Xanthomonadales | 308 | 3.33 % |
Family
| Family | # of Hosts | # of Hosts as Percentage of Cluster |
|---|
| Acetobacteraceae | 112 | 1.21 % |
| Acidimicrobiaceae | 6 | 0.06 % |
| Acidithiobacillaceae | 59 | 0.64 % |
| Acidobacteriaceae | 89 | 0.96 % |
| Acidothermaceae | 6 | 0.06 % |
| Actinomycetaceae | 28 | 0.30 % |
| Aeromonadaceae | 59 | 0.64 % |
| Alcaligenaceae | 85 | 0.92 % |
| Alcanivoracaceae | 31 | 0.33 % |
| Alicyclobacillaceae | 39 | 0.42 % |
| Alteromonadaceae | 38 | 0.41 % |
| Anaerolineaceae | 6 | 0.06 % |
| Bacillaceae | 6 | 0.06 % |
| Bdellovibrionaceae | 1 | 0.01 % |
| Beijerinckiaceae | 16 | 0.17 % |
| Beutenbergiaceae | 9 | 0.10 % |
| Bifidobacteriaceae | 197 | 2.13 % |
| Bradyrhizobiaceae | 188 | 2.03 % |
| Brucellaceae | 92 | 0.99 % |
| Burkholderiaceae | 828 | 8.94 % |
| Caldilineaceae | 10 | 0.11 % |
| Cardiobacteriaceae | 1 | 0.01 % |
| Catenulisporaceae | 26 | 0.28 % |
| Caulobacteraceae | 43 | 0.46 % |
| Cellulomonadaceae | 34 | 0.37 % |
| Chlorobiaceae | 34 | 0.37 % |
| Chloroflexaceae | 34 | 0.37 % |
| Chromatiaceae | 72 | 0.78 % |
| Chromobacteriaceae | 55 | 0.59 % |
| Chrysiogenaceae | 14 | 0.15 % |
| Clostridiales Family XVII | 21 | 0.23 % |
| Comamonadaceae | 408 | 4.41 % |
| Conexibacteraceae | 7 | 0.08 % |
| Coriobacteriaceae | 72 | 0.78 % |
| Corynebacteriaceae | 363 | 3.92 % |
| Cystobacteraceae | 64 | 0.69 % |
| Cytophagaceae | 4 | 0.04 % |
| Deinococcaceae | 73 | 0.79 % |
| Dermabacteraceae | 12 | 0.13 % |
| Dermacoccaceae | 19 | 0.21 % |
| Desulfarculaceae | 8 | 0.09 % |
| Desulfobacteraceae | 1 | 0.01 % |
| Desulfobulbaceae | 30 | 0.32 % |
| Desulfohalobiaceae | 2 | 0.02 % |
| Desulfomicrobiaceae | 19 | 0.21 % |
| Desulfovibrionaceae | 94 | 1.02 % |
| Ectothiorhodospiraceae | 69 | 0.75 % |
| Enterobacteriaceae | 26 | 0.28 % |
| Erythrobacteraceae | 6 | 0.06 % |
| Ferrimonadaceae | 15 | 0.16 % |
| Frankiaceae | 163 | 1.76 % |
| Gallionellaceae | 15 | 0.16 % |
| Gemmatimonadaceae | 8 | 0.09 % |
| Geobacteraceae | 78 | 0.84 % |
| Geodermatophilaceae | 58 | 0.63 % |
| Glycomycetaceae | 34 | 0.37 % |
| Gordoniaceae | 40 | 0.43 % |
| Hahellaceae | 3 | 0.03 % |
| Halobacteriaceae | 300 | 3.24 % |
| Halomonadaceae | 40 | 0.43 % |
| Halothiobacillaceae | 3 | 0.03 % |
| Heliobacteriaceae | 5 | 0.05 % |
| Hydrogenophilaceae | 11 | 0.12 % |
| Hyphomicrobiaceae | 20 | 0.22 % |
| Hyphomonadaceae | 15 | 0.16 % |
| Intrasporangiaceae | 13 | 0.14 % |
| Jonesiaceae | 19 | 0.21 % |
| Kineosporiaceae | 15 | 0.16 % |
| Kofleriaceae | 34 | 0.37 % |
| Magnetococcaceae | 14 | 0.15 % |
| Methanomicrobiaceae | 10 | 0.11 % |
| Methanopyraceae | 14 | 0.15 % |
| Methylobacteriaceae | 242 | 2.61 % |
| Methylococcaceae | 8 | 0.09 % |
| Methylophilaceae | 14 | 0.15 % |
| Microbacteriaceae | 34 | 0.37 % |
| Micrococcaceae | 117 | 1.26 % |
| Micromonosporaceae | 136 | 1.47 % |
| Moraxellaceae | 1 | 0.01 % |
| Mycobacteriaceae | 407 | 4.40 % |
| Myxococcaceae | 226 | 2.44 % |
| Nakamurellaceae | 24 | 0.26 % |
| Nitrosomonadaceae | 16 | 0.17 % |
| Nitrospiraceae | 23 | 0.25 % |
| Nocardiaceae | 120 | 1.30 % |
| Nocardioidaceae | 38 | 0.41 % |
| Nocardiopsaceae | 71 | 0.77 % |
| Nostocaceae | 4 | 0.04 % |
| Opitutaceae | 13 | 0.14 % |
| Oscillospiraceae | 2 | 0.02 % |
| Oxalobacteraceae | 62 | 0.67 % |
| Paenibacillaceae | 18 | 0.19 % |
| Parvularculaceae | 8 | 0.09 % |
| Pelobacteraceae | 25 | 0.27 % |
| Peptococcaceae | 3 | 0.03 % |
| Phycisphaeraceae | 16 | 0.17 % |
| Phyllobacteriaceae | 77 | 0.83 % |
| Planctomycetaceae | 52 | 0.56 % |
| Polyangiaceae | 41 | 0.44 % |
| Prochlorococcaceae | 22 | 0.24 % |
| Promicromonosporaceae | 19 | 0.21 % |
| Propionibacteriaceae | 83 | 0.90 % |
| Pseudomonadaceae | 635 | 6.86 % |
| Pseudonocardiaceae | 202 | 2.18 % |
| Puniceicoccaceae | 11 | 0.12 % |
| Rhizobiaceae | 150 | 1.62 % |
| Rhodobacteraceae | 151 | 1.63 % |
| Rhodobiaceae | 4 | 0.04 % |
| Rhodocyclaceae | 83 | 0.90 % |
| Rhodospirillaceae | 97 | 1.05 % |
| Rhodothermaceae | 49 | 0.53 % |
| Rubrobacteraceae | 13 | 0.14 % |
| Ruminococcaceae | 3 | 0.03 % |
| Sanguibacteraceae | 13 | 0.14 % |
| Segniliparaceae | 13 | 0.14 % |
| Shewanellaceae | 57 | 0.62 % |
| Solibacteraceae | 22 | 0.24 % |
| Sphaerobacteraceae | 8 | 0.09 % |
| Sphingomonadaceae | 76 | 0.82 % |
| Spirochaetaceae | 3 | 0.03 % |
| Streptomycetaceae | 463 | 5.00 % |
| Streptosporangiaceae | 38 | 0.41 % |
| Synechococcaceae | 133 | 1.44 % |
| Synergistaceae | 2 | 0.02 % |
| Syntrophaceae | 1 | 0.01 % |
| Syntrophobacteraceae | 13 | 0.14 % |
| Thermaceae | 54 | 0.58 % |
| Thermoanaerobacteraceae | 3 | 0.03 % |
| Thermomicrobiaceae | 8 | 0.09 % |
| Thermomonosporaceae | 38 | 0.41 % |
| Trueperaceae | 21 | 0.23 % |
| Tsukamurellaceae | 7 | 0.08 % |
| Unclassified | 145 | 1.57 % |
| Veillonellaceae | 13 | 0.14 % |
| Vibrionaceae | 3 | 0.03 % |
| Xanthobacteraceae | 55 | 0.59 % |
| Xanthomonadaceae | 308 | 3.33 % |
Genus
| Genus | # of Hosts | # of Hosts as Percentage of Cluster |
|---|
| Acaryochloris | 7 | 0.08 % |
| Accumulibacter | 19 | 0.21 % |
| Acetobacter | 2 | 0.02 % |
| Achromobacter | 17 | 0.18 % |
| Acidimicrobium | 6 | 0.06 % |
| Acidiphilium | 35 | 0.38 % |
| Acidithiobacillus | 59 | 0.64 % |
| Acidobacterium | 18 | 0.19 % |
| Acidothermus | 6 | 0.06 % |
| Acidovorax | 101 | 1.09 % |
| Acinetobacter | 1 | 0.01 % |
| Actinoplanes | 14 | 0.15 % |
| Actinosynnema | 38 | 0.41 % |
| Aeromonas | 52 | 0.56 % |
| Agrobacterium | 47 | 0.51 % |
| Alcanivorax | 31 | 0.33 % |
| Alicycliphilus | 45 | 0.49 % |
| Alicyclobacillus | 32 | 0.35 % |
| Alkalilimnicola | 14 | 0.15 % |
| Allochromatium | 18 | 0.19 % |
| Ammonifex | 3 | 0.03 % |
| Amycolatopsis | 44 | 0.48 % |
| Amycolicicoccus | 4 | 0.04 % |
| Anabaena | 2 | 0.02 % |
| Anaerolinea | 6 | 0.06 % |
| Anaeromyxobacter | 49 | 0.53 % |
| Arcanobacterium | 12 | 0.13 % |
| Aromatoleum | 13 | 0.14 % |
| Arthrobacter | 82 | 0.89 % |
| Asticcacaulis | 9 | 0.10 % |
| Azoarcus | 18 | 0.19 % |
| Azorhizobium | 14 | 0.15 % |
| Azospira | 18 | 0.19 % |
| Azospirillum | 39 | 0.42 % |
| Azotobacter | 66 | 0.71 % |
| Bdellovibrio | 1 | 0.01 % |
| Beijerinckia | 7 | 0.08 % |
| Beutenbergia | 9 | 0.10 % |
| Bifidobacterium | 197 | 2.13 % |
| Blastococcus | 18 | 0.19 % |
| Bordetella | 59 | 0.64 % |
| Brachybacterium | 12 | 0.13 % |
| Bradyrhizobium | 105 | 1.13 % |
| Brevundimonas | 3 | 0.03 % |
| Brucella | 80 | 0.86 % |
| Burkholderia | 619 | 6.68 % |
| Caldilinea | 10 | 0.11 % |
| Catenulispora | 26 | 0.28 % |
| Caulobacter | 26 | 0.28 % |
| Cellulomonas | 21 | 0.23 % |
| Cellvibrio | 14 | 0.15 % |
| Chelativorans | 8 | 0.09 % |
| Chloracidobacterium | 11 | 0.12 % |
| Chlorobaculum | 19 | 0.21 % |
| Chlorobium | 6 | 0.06 % |
| Chloroflexus | 13 | 0.14 % |
| Chromobacterium | 18 | 0.19 % |
| Chromohalobacter | 17 | 0.18 % |
| Clavibacter | 19 | 0.21 % |
| Collimonas | 25 | 0.27 % |
| Comamonas | 23 | 0.25 % |
| Conexibacter | 7 | 0.08 % |
| Coraliomargarita | 11 | 0.12 % |
| Corallococcus | 35 | 0.38 % |
| Coriobacterium | 16 | 0.17 % |
| Corynebacterium | 363 | 3.92 % |
| Cryptobacterium | 1 | 0.01 % |
| Cupriavidus | 95 | 1.03 % |
| Dechloromonas | 20 | 0.22 % |
| Deinococcus | 73 | 0.79 % |
| Delftia | 77 | 0.83 % |
| Desulfarculus | 8 | 0.09 % |
| Desulfobacca | 1 | 0.01 % |
| Desulfobulbus | 24 | 0.26 % |
| Desulfococcus | 1 | 0.01 % |
| Desulfohalobium | 2 | 0.02 % |
| Desulfomicrobium | 19 | 0.21 % |
| Desulforudis | 3 | 0.03 % |
| Desulfovibrio | 94 | 1.02 % |
| Desulfurispirillum | 14 | 0.15 % |
| Desulfurivibrio | 6 | 0.06 % |
| Dichelobacter | 1 | 0.01 % |
| Dickeya | 2 | 0.02 % |
| Dinoroseobacter | 16 | 0.17 % |
| Dyadobacter | 3 | 0.03 % |
| Edwardsiella | 1 | 0.01 % |
| Eggerthella | 29 | 0.31 % |
| Erwinia | 3 | 0.03 % |
| Erythrobacter | 6 | 0.06 % |
| Escherichia | 10 | 0.11 % |
| Ethanoligenens | 3 | 0.03 % |
| Ferrimonas | 15 | 0.16 % |
| Fibrella | 1 | 0.01 % |
| Frankia | 163 | 1.76 % |
| Frateuria | 11 | 0.12 % |
| Gallionella | 4 | 0.04 % |
| Gemmatimonas | 8 | 0.09 % |
| Geobacillus | 6 | 0.06 % |
| Geobacter | 78 | 0.84 % |
| Geodermatophilus | 23 | 0.25 % |
| Gloeobacter | 23 | 0.25 % |
| Gloeocapsa | 2 | 0.02 % |
| Gluconacetobacter | 36 | 0.39 % |
| Gluconobacter | 16 | 0.17 % |
| Gordonia | 40 | 0.43 % |
| Granulibacter | 10 | 0.11 % |
| Granulicella | 45 | 0.49 % |
| Hahella | 3 | 0.03 % |
| Halalkalicoccus | 11 | 0.12 % |
| Haliangium | 34 | 0.37 % |
| Haloarcula | 35 | 0.38 % |
| Halobacterium | 22 | 0.24 % |
| Haloferax | 19 | 0.21 % |
| Halogeometricum | 17 | 0.18 % |
| Halomicrobium | 16 | 0.17 % |
| Halomonas | 23 | 0.25 % |
| Halopiger | 15 | 0.16 % |
| Haloquadratum | 8 | 0.09 % |
| Halorhabdus | 14 | 0.15 % |
| Halorhodospira | 12 | 0.13 % |
| Halorubrum | 18 | 0.19 % |
| Haloterrigena | 21 | 0.23 % |
| Halothiobacillus | 3 | 0.03 % |
| Halovivax | 13 | 0.14 % |
| Heliobacterium | 5 | 0.05 % |
| Herbaspirillum | 21 | 0.23 % |
| Herminiimonas | 8 | 0.09 % |
| Hirschia | 1 | 0.01 % |
| Hyphomicrobium | 9 | 0.10 % |
| Hyphomonas | 9 | 0.10 % |
| Intrasporangium | 13 | 0.14 % |
| Isoptericola | 10 | 0.11 % |
| Isosphaera | 4 | 0.04 % |
| Jannaschia | 11 | 0.12 % |
| Janthinobacterium | 8 | 0.09 % |
| Jonesia | 19 | 0.21 % |
| Ketogulonicigenium | 2 | 0.02 % |
| Kineococcus | 15 | 0.16 % |
| Kitasatospora | 38 | 0.41 % |
| Klebsiella | 1 | 0.01 % |
| Kocuria | 12 | 0.13 % |
| Komagataeibacter | 13 | 0.14 % |
| Koribacter | 7 | 0.08 % |
| Kribbella | 17 | 0.18 % |
| Kyrpidia | 7 | 0.08 % |
| Kytococcus | 19 | 0.21 % |
| Laribacter | 18 | 0.19 % |
| Leifsonia | 14 | 0.15 % |
| Leptothrix | 15 | 0.16 % |
| Magnetococcus | 14 | 0.15 % |
| Magnetospirillum | 20 | 0.22 % |
| Maricaulis | 5 | 0.05 % |
| Marinithermus | 12 | 0.13 % |
| Marinobacter | 38 | 0.41 % |
| Meiothermus | 10 | 0.11 % |
| Mesorhizobium | 69 | 0.75 % |
| Methanoculleus | 10 | 0.11 % |
| Methanopyrus | 14 | 0.15 % |
| Methylibium | 20 | 0.22 % |
| Methylobacillus | 9 | 0.10 % |
| Methylobacterium | 242 | 2.61 % |
| Methylocella | 9 | 0.10 % |
| Methylococcus | 7 | 0.08 % |
| Methylomonas | 1 | 0.01 % |
| Methylovorus | 5 | 0.05 % |
| Micavibrio | 1 | 0.01 % |
| Microbacterium | 1 | 0.01 % |
| Micrococcus | 14 | 0.15 % |
| Microlunatus | 11 | 0.12 % |
| Micromonospora | 42 | 0.45 % |
| Mobiluncus | 16 | 0.17 % |
| Modestobacter | 17 | 0.18 % |
| Mycobacterium | 403 | 4.35 % |
| Myxococcus | 142 | 1.53 % |
| Nakamurella | 24 | 0.26 % |
| Natrialba | 20 | 0.22 % |
| Natrinema | 16 | 0.17 % |
| Natronobacterium | 12 | 0.13 % |
| Natronococcus | 23 | 0.25 % |
| Natronomonas | 20 | 0.22 % |
| Nitrobacter | 11 | 0.12 % |
| Nitrosococcus | 5 | 0.05 % |
| Nitrosomonas | 10 | 0.11 % |
| Nitrosospira | 6 | 0.06 % |
| Nitrospira | 23 | 0.25 % |
| Nocardia | 59 | 0.64 % |
| Nocardioides | 21 | 0.23 % |
| Nocardiopsis | 54 | 0.58 % |
| Nostoc | 2 | 0.02 % |
| Novosphingobium | 20 | 0.22 % |
| Oceanimonas | 6 | 0.06 % |
| Oceanithermus | 13 | 0.14 % |
| Ochrobactrum | 12 | 0.13 % |
| Octadecabacter | 3 | 0.03 % |
| Oligotropha | 14 | 0.15 % |
| Olsenella | 14 | 0.15 % |
| Opitutus | 13 | 0.14 % |
| Oscillibacter | 2 | 0.02 % |
| Paenibacillus | 5 | 0.05 % |
| Paracoccus | 18 | 0.19 % |
| Parvibaculum | 4 | 0.04 % |
| Parvularcula | 8 | 0.09 % |
| Pectobacterium | 2 | 0.02 % |
| Pelagibacterium | 3 | 0.03 % |
| Pelobacter | 25 | 0.27 % |
| Pelodictyon | 7 | 0.08 % |
| Phenylobacterium | 5 | 0.05 % |
| Phycisphaera | 16 | 0.17 % |
| Pirellula | 9 | 0.10 % |
| Planctomyces | 6 | 0.06 % |
| Polaromonas | 42 | 0.45 % |
| Polymorphum | 8 | 0.09 % |
| Prochlorococcus | 22 | 0.24 % |
| Propionibacterium | 72 | 0.78 % |
| Prosthecochloris | 2 | 0.02 % |
| Pseudogulbenkiania | 19 | 0.21 % |
| Pseudomonas | 568 | 6.13 % |
| Pseudonocardia | 21 | 0.23 % |
| Pseudovibrio | 3 | 0.03 % |
| Pseudoxanthomonas | 30 | 0.32 % |
| Pusillimonas | 9 | 0.10 % |
| Rahnella | 2 | 0.02 % |
| Ralstonia | 114 | 1.23 % |
| Ramlibacter | 13 | 0.14 % |
| Renibacterium | 1 | 0.01 % |
| Rhizobium | 35 | 0.38 % |
| Rhodanobacter | 19 | 0.21 % |
| Rhodobacter | 59 | 0.64 % |
| Rhodococcus | 61 | 0.66 % |
| Rhodoferax | 8 | 0.09 % |
| Rhodomicrobium | 8 | 0.09 % |
| Rhodopirellula | 4 | 0.04 % |
| Rhodopseudomonas | 58 | 0.63 % |
| Rhodospirillum | 38 | 0.41 % |
| Rhodothermus | 21 | 0.23 % |
| Roseiflexus | 21 | 0.23 % |
| Roseobacter | 14 | 0.15 % |
| Rothia | 8 | 0.09 % |
| Rubrivivax | 14 | 0.15 % |
| Rubrobacter | 13 | 0.14 % |
| Ruegeria | 25 | 0.27 % |
| Saccharomonospora | 13 | 0.14 % |
| Saccharopolyspora | 29 | 0.31 % |
| Saccharothrix | 48 | 0.52 % |
| Salinibacter | 28 | 0.30 % |
| Salinispora | 58 | 0.63 % |
| Salmonella | 3 | 0.03 % |
| Sanguibacter | 13 | 0.14 % |
| Segniliparus | 13 | 0.14 % |
| Selenomonas | 13 | 0.14 % |
| Shewanella | 40 | 0.43 % |
| Shigella | 1 | 0.01 % |
| Sideroxydans | 11 | 0.12 % |
| Simiduia | 5 | 0.05 % |
| Singulisphaera | 29 | 0.31 % |
| Sinorhizobium | 68 | 0.73 % |
| Slackia | 12 | 0.13 % |
| Sodalis | 1 | 0.01 % |
| Solibacter | 22 | 0.24 % |
| Sorangium | 41 | 0.44 % |
| Sphaerobacter | 8 | 0.09 % |
| Sphingobium | 45 | 0.49 % |
| Sphingomonas | 8 | 0.09 % |
| Sphingopyxis | 2 | 0.02 % |
| Spirochaeta | 3 | 0.03 % |
| Stackebrandtia | 34 | 0.37 % |
| Starkeya | 12 | 0.13 % |
| Stenotrophomonas | 45 | 0.49 % |
| Stigmatella | 64 | 0.69 % |
| Streptomyces | 425 | 4.59 % |
| Streptosporangium | 38 | 0.41 % |
| Symbiobacterium | 17 | 0.18 % |
| Synechococcus | 133 | 1.44 % |
| Syntrophobacter | 13 | 0.14 % |
| Terriglobus | 15 | 0.16 % |
| Thauera | 14 | 0.15 % |
| Thermaerobacter | 21 | 0.23 % |
| Thermanaerovibrio | 2 | 0.02 % |
| Thermobacillus | 13 | 0.14 % |
| Thermobaculum | 9 | 0.10 % |
| Thermobifida | 17 | 0.18 % |
| Thermobispora | 9 | 0.10 % |
| Thermomicrobium | 8 | 0.09 % |
| Thermomonospora | 38 | 0.41 % |
| Thermosynechococcus | 4 | 0.04 % |
| Thermus | 19 | 0.21 % |
| Thioalkalivibrio | 43 | 0.46 % |
| Thiobacillus | 11 | 0.12 % |
| Thiocystis | 16 | 0.17 % |
| Thioflavicoccus | 33 | 0.36 % |
| Thiomonas | 8 | 0.09 % |
| Tolumonas | 1 | 0.01 % |
| Truepera | 21 | 0.23 % |
| Tsukamurella | 7 | 0.08 % |
| unclassified Archaea | 17 | 0.18 % |
| unclassified Gammaproteobacteria | 9 | 0.10 % |
| Variovorax | 43 | 0.46 % |
| Verminephrobacter | 33 | 0.36 % |
| Verrucosispora | 22 | 0.24 % |
| Vibrio | 3 | 0.03 % |
| Xanthobacter | 29 | 0.31 % |
| Xanthomonas | 201 | 2.17 % |
| Xylanimonas | 9 | 0.10 % |
| Xylella | 2 | 0.02 % |
| Zymomonas | 1 | 0.01 % |