Pre_GI: BLASTP Hits

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Query: NC_021508:949769:967796 Treponema pallidum subsp. pallidum SS14, complete genome

Start: 967796, End: 968896, Length: 1101

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organisms is divided into subspecies each of which causes a specific disease. pallidum causes the venereal disease syphilis. pertenue, carateum and endemicum cause the skin infections yaws, pinta and bejel, respectively. Cells are motile, slender, helically shaped flexible organisms, 0.1-0.18 microns in diameter and 6-20 microns long.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016844:950231:9682589682589693581101Treponema pallidum subsp. pallidum DAL-1 chromosome, completetRNA-pseudouridine synthase I0691
NC_000919:948287:9663149663149674141101Treponema pallidum subsp. pallidum str. Nichols, complete genometRNA pseudouridine 55 synthase (truB)0691
NC_010741:949732:9677599677599688591101Treponema pallidum subsp. pallidum SS14, complete genometRNA pseudouridine 55 synthase0691
NC_017268:949543:9675709675709686551086Treponema pallidum subsp. pallidum str. Chicago chromosome,tRNA pseudouridine synthase B0682
NC_011244:863306:871525871525872370846Borrelia recurrentis A1, complete genometRNA pseudouridine 55 synthase3e-40166
NC_007798:80500:812668126681973708Neorickettsia sennetsu str. Miyayama, complete genometRNA pseudouridine synthase B2e-32140
NC_006832:587162:592225592225593115891Ehrlichia ruminantium str. Welgevonden, complete genometRNA pseudouridine synthase B8e-30131
NC_006831:583094:588161588161589051891Ehrlichia ruminantium str. Gardel, complete genometRNA pseudouridine synthase B8e-30131
NC_005295:607319:612383612383613273891Ehrlichia ruminantium str. Welgevonden, complete genomeputative tRNA pseudouridine synthase B8e-30131
NC_013315:1370000:138218913821891383094906Clostridium difficile CD196 chromosome, complete genometRNA pseudouridine synthase B8e-30131
NC_017179:1378875:139196313919631392868906Clostridium difficile BI1, complete genometRNA pseudouridine synthase B8e-30131
NC_011728:832073:843503843503844351849Borrelia burgdorferi ZS7, complete genometRNA pseudouridine synthase B7e-30131
NC_007799:727798:738289738289739179891Ehrlichia chaffeensis str. Arkansas, complete genometRNA pseudouridine synthase B2e-29130
NC_011898:513835:528246528246529175930Clostridium cellulolyticum H10, complete genometRNA pseudouridine synthase B4e-29129
NC_010516:2511035:253450025345002535369870Clostridium botulinum B1 str. Okra, complete genometRNA pseudouridine synthase B7e-29128
NC_004129:957890:976448976448977365918Pseudomonas fluorescens Pf-5, complete genometRNA pseudouridine synthase B2e-28127
NC_009495:2524000:254627725462772547146870Clostridium botulinum A str. ATCC 3502 chromosome, complete genometRNA pseudouridine synthase B1e-28127
NC_009697:2394826:241830024183002419169870Clostridium botulinum A str. ATCC 19397 chromosome, completetRNA pseudouridine synthase B1e-28127
NC_009698:2367171:239064523906452391514870Clostridium botulinum A str. Hall chromosome, complete genometRNA pseudouridine synthase B1e-28127
NC_014328:1405484:141581414158141416695882Clostridium ljungdahlii ATCC 49587 chromosome, complete genometRNA pseudouridine synthase B1e-28127
NC_012658:2584355:260447326044732605342870Clostridium botulinum Ba4 str. 657 chromosome, complete genometRNA pseudouridine synthase B1e-28127
NC_010520:2585014:260903126090312609900870Clostridium botulinum A3 str. Loch Maree, complete genometRNA pseudouridine synthase B9e-29127
NC_008262:1835613:184906718490671849951885Clostridium perfringens SM101, complete genometRNA pseudouridine synthase b9e-28124
NC_010001:3369500:337468933746893375612924Clostridium phytofermentans ISDg, complete genometRNA pseudouridine synthase B1e-27124
NC_008319:1950889:196486919648691965762894Synechococcus sp. CC9311, complete genometRNA pseudouridine synthase B4e-27122
NC_013947:5431741:543295454329545433886933Stackebrandtia nassauensis DSM 44728 chromosome, complete genometRNA pseudouridine synthase B7e-27121
NC_014387:1175927:119095711909571191916960Butyrivibrio proteoclasticus B316 chromosome 1, complete genometRNA pseudouridine synthase B TruB8e-27121
NC_007516:1947214:195213219521321953079948Synechococcus sp. CC9605, complete genometRNA pseudouridine synthase B1e-26121
NC_008261:2157713:217501921750192175903885Clostridium perfringens ATCC 13124, complete genometRNA pseudouridine synthase B2e-26120
NC_015380:303215:308106308106308984879Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genometRNA pseudouridine synthase B2e-26120
NC_012560:4311906:431791043179104318827918Azotobacter vinelandii DJ, complete genometRNA pseudouridine synthase B2e-26119
NC_021150:4311902:431790643179064318823918Azotobacter vinelandii CA6, complete genometRNA pseudouridine synthase B2e-26119
NC_007907:2879568:288056928805692881471903Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-26118
NC_011830:3904034:390785639078563908740885Desulfitobacterium hafniense DCB-2, complete genometRNA pseudouridine synthase B8e-26118
NC_014218:696409:700292700292701272981Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometRNA pseudouridine synthase B8e-26118
NC_013216:3376186:338441933844193385348930Desulfotomaculum acetoxidans DSM 771, complete genometRNA pseudouridine synthase B9e-26117
NC_014376:3214222:321907932190793219984906Clostridium saccharolyticum WM1 chromosome, complete genometRNA pseudouridine synthase B2e-25116
NC_008343:2589680:261120226112022612131930Granulibacter bethesdensis CGDNIH1, complete genometRNA pseudouridine synthase B2e-25116
NC_019970:1343670:134923713492371350106870Thermoanaerobacterium thermosaccharolyticum M0795, complete genometRNA pseudouridine 55 synthase4e-25115
NC_016627:2799453:281416628141662815053888Clostridium clariflavum DSM 19732 chromosome, complete genometRNA pseudouridine synthase B5e-25115
NC_009483:2201986:220774022077402208672933Geobacter uraniireducens Rf4 chromosome, complete genometRNA pseudouridine synthase B6e-25115
NC_020134:1173000:118373611837361184647912Clostridium stercorarium subsp. stercorarium DSM 8532, completetRNA pseudouridine synthase B7e-25115
NC_013894:1380564:140195314019531402822870Thermocrinis albus DSM 14484 chromosome, complete genometRNA pseudouridine synthase B7e-25115
NC_016632:74569:834458344584407963Serratia symbiotica str. 'Cinara cedri' chromosome, completetRNA pseudouridine 55 synthetase1e-24114
NC_014098:1553900:155488215548821555784903Bacillus tusciae DSM 2912 chromosome, complete genometRNA pseudouridine synthase B2e-24113
NC_011296:530408:542536542536543444909Thermodesulfovibrio yellowstonii DSM 11347, complete genometRNA pseudouridine synthase B3e-24113
NC_013016:1257942:126517412651741266094921Neisseria meningitidis alpha14 chromosome, complete genometRNA pseudouridine synthase B5e-24112
NC_017505:1338661:134525313452531346203951Neisseria meningitidis alpha710 chromosome, complete genometRNA pseudouridine synthase B5e-24112
NC_017353:1699652:170510917051091706026918Staphylococcus lugdunensis N920143, complete genomeputative tRNA pseudouridine synthase B4e-24112
NC_015318:706374:719620719620720471852Hippea maritima DSM 10411 chromosome, complete genometRNA pseudouridine synthase B4e-24112
NS_000191:344000:357533357533358225693Uncultured Termite group 1 bacterium phylotype Rs-D17, completetRNA pseudouridine synthase B4e-24112
NC_020419:344000:357533357533358225693Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completetRNA pseudouridine synthase B4e-24112
NC_015589:1899329:192128319212831922218936Desulfotomaculum ruminis DSM 2154 chromosome, complete genometRNA pseudouridine synthase B4e-24112
NC_017516:917817:931945931945932868924Neisseria meningitidis H44/76 chromosome, complete genometRNA pseudouridine synthase B3e-24112
NC_003116:1488576:149313714931371494057921Neisseria meningitidis Z2491, complete genometRNA pseudouridine synthase B1e-23111
NC_017512:1264542:126910312691031270023921Neisseria meningitidis WUE 2594, complete genometRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase; Psi55 synthase; tRNA-uridine isomerase; tRNA pseudouridylate synthase)1e-23111
NC_011528:535680:552066552066552995930Coxiella burnetii CbuK_Q154, complete genometRNA pseudouridine synthase B1e-23111
NC_012121:897866:915858915858916772915Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative tRNA pseudouridine synthase B8e-24111
NC_011527:525759:545429545429546358930Coxiella burnetii CbuG_Q212, complete genometRNA pseudouridine synthase B2e-23110
NC_014330:2520906:252726625272662528126861Brachyspira pilosicoli 95/1000 chromosome, complete genomepseudouridylate synthase2e-23110
NC_002971:1379567:138092113809211381850930Coxiella burnetii RSA 493, complete genometRNA pseudouridine synthase B2e-23110
NC_017517:1377617:138285713828571383777921Neisseria meningitidis M01-240355 chromosome, complete genometRNA pseudouridine synthase B2e-23110
NC_019908:700000:712564712564713424861Brachyspira pilosicoli P43/6/78 chromosome, complete genomepseudouridylate synthase2e-23110
NC_015186:597695:602530602530603465936Acidiphilium multivorum AIU301, complete genometRNA pseudouridine synthase B2e-23110
NC_009484:489398:493583493583494518936Acidiphilium cryptum JF-5 chromosome, complete genometRNA pseudouridine synthase B2e-23110
NC_014103:3985897:399405039940503994967918Bacillus megaterium DSM319 chromosome, complete genometRNA pseudouridine synthase B1e-23110
NC_010729:619664:619664619664620440777Porphyromonas gingivalis ATCC 33277, complete genomeputative tRNA pseudouridine synthase B1e-23110
NC_018607:1251357:125894612589461259806861Brachyspira pilosicoli B2904 chromosome, complete genomepseudouridylate synthase4e-23109
NC_014152:1430156:144627914462791447211933Thermincola sp. JR, complete genometRNA pseudouridine synthase B4e-23109
NC_018604:1489567:149666514966651497525861Brachyspira pilosicoli WesB complete genomepseudouridylate synthase3e-23109
NC_010117:1461502:146150214615021462431930Coxiella burnetii RSA 331, complete genometRNA pseudouridine synthase B3e-23109
NC_014933:979063:100122810012281001935708Bacteroides helcogenes P 36-108 chromosome, complete genometRNA pseudouridine synthase B9e-23108
NC_002528:404545:414247414247415185939Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetRNA pseudouridine 55 synthase2e-22107
NC_000918:465627:481480481480482343864Aquifex aeolicus VF5, complete genometRNA pseudouridine 55 synthase2e-22107
NC_004545:392685:395408395408396316909Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genometRNA pseudouridine synthase B2e-22107
NC_015672:1566565:157461415746141575513900Flexistipes sinusarabici DSM 4947 chromosome, complete genometRNA pseudouridine synthase B1e-22107
NC_011999:936500:946464946464947360897Macrococcus caseolyticus JCSC5402, complete genometRNA pseudouridine 5S synthase homolog1e-22107
NC_020075:114790:128626128626129408783Candidatus Blochmannia chromaiodes str. 640, complete genometRNA pseudouridine synthase B2e-22106
NC_011035:1033942:103917710391771040097921Neisseria gonorrhoeae NCCP11945 chromosome, complete genometRNA pseudouridine synthase B3e-22106
NC_017511:950411:955007955007955927921Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genometRNA pseudouridine synthase B3e-22106
NC_002946:618439:632563632563633483921Neisseria gonorrhoeae FA 1090, complete genomeputative tRNA pseudouridine synthase B3e-22106
NC_014657:944000:959752959752960624873Caldicellulosiruptor owensensis OL chromosome, complete genometRNA pseudouridine synthase b5e-22105
NC_016599:2119631:213962621396262140342717Owenweeksia hongkongensis DSM 17368 chromosome, complete genometRNA pseudouridine 55 synthase2e-21103
NC_009465:29735:586685866859576909Candidatus Vesicomyosocius okutanii HA, complete genometRNA pseudouridine synthase B2e-21103
NC_013943:1381000:139291113929111393804894Denitrovibrio acetiphilus DSM 12809 chromosome, complete genometRNA pseudouridine synthase B6e-21102
NC_020291:1464500:147394214739421474817876Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA pseudouridine synthase B6e-21102
NC_012440:585568:587544587544588425882Persephonella marina EX-H1, complete genometRNA pseudouridine synthase B5e-21102
NC_009674:2551759:255783225578322558755924Bacillus cytotoxicus NVH 391-98 chromosome, complete genometRNA pseudouridine synthase B3e-21102
NC_004461:921364:952187952187953104918Staphylococcus epidermidis ATCC 12228, complete genometRNA pseudouridine 5S synthase3e-21102
NC_014727:1292213:130981813098181310714897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,tRNA pseudouridine synthase b3e-21102
NC_005823:3280000:328882432888243289675852Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130tRNA pseudouridine synthase B8e-21101
NC_007622:1214629:122880712288071229724918Staphylococcus aureus RF122, complete genometRNA-pseudouridine 5S synthase8e-21101
NC_009782:1327340:134151613415161342433918Staphylococcus aureus subsp. aureus Mu3, complete genometRNA pseudouridine 5S synthase1e-20101
NC_012659:3617000:362316936231693624092924Bacillus anthracis str. A0248, complete genometRNA pseudouridine synthase B2e-20100
NC_005945:3615623:362383736238373624760924Bacillus anthracis str. Sterne, complete genometRNA pseudouridine synthase B2e-20100
NC_008054:1117703:113224411322441133140897Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePseudouridylate synthase2e-20100
NC_007530:3616828:362326936232693624192924Bacillus anthracis str. 'Ames Ancestor', complete genome2e-20100
NC_010184:3675424:368189036818903682813924Bacillus weihenstephanensis KBAB4, complete genometRNA pseudouridine synthase B2e-20100
NC_004342:929033:940128940128940979852Leptospira interrogans serovar Lai str. 56601 chromosome I,tRNA pseudouridine synthase B2e-20100
NC_011725:3821789:382785538278553828778924Bacillus cereus B4264 chromosome, complete genometRNA pseudouridine synthase B2e-20100
NC_017338:1234077:124594512459451246862918Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative tRNA pseudouridine synthase B2e-20100
NC_004459:1679335:168255316825531683497945Vibrio vulnificus CMCP6 chromosome I, complete sequencetRNA pseudouridine synthase B1e-20100
NC_005139:2731623:274478927447892745733945Vibrio vulnificus YJ016 chromosome I, complete sequencetRNA pseudouridine synthase B1e-20100
NC_014965:670115:674845674845675789945Vibrio vulnificus MO6-24/O chromosome I, complete sequencetRNA pseudouridine synthase B/tRNA Psi551e-20100
NC_005061:96536:116087116087116854768Candidatus Blochmannia floridanus, complete genometRNA pseudouridine 5S synthase2e-20100
NC_017259:388000:396914396914397852939Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,tRNA pseudouridine 55 synthase2e-20100
NC_002952:1291444:130562213056221306539918Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative tRNA pseudouridine synthase B3e-2099.8
NC_014335:3567931:357399435739943574917924Bacillus cereus biovar anthracis str. CI chromosome, completetRNA pseudouridine synthase B3e-2099.8
NC_005957:3638750:364481336448133645736924Bacillus thuringiensis serovar konkukian str. 97-27, completetRNA pseudouridine synthase B3e-2099.8
NC_012472:3661912:366797536679753668898924Bacillus cereus 03BB102, complete genometRNA pseudouridine synthase B3e-2099.8
NC_008600:3643905:364996836499683650891924Bacillus thuringiensis str. Al Hakam, complete genometRNA pseudouridine synthase B3e-2099.8
NC_016779:3579743:358580635858063586729924Bacillus cereus F837/76 chromosome, complete genometRNA pseudouridine synthase B3e-2099.8
NC_011773:3651963:365802636580263658949924Bacillus cereus AH820 chromosome, complete genometRNA pseudouridine synthase B3e-2099.8
NC_006274:3697255:370369637036963704619924Bacillus cereus E33L, complete genometRNA pseudouridine synthase B3e-2099.8
NC_017341:1291583:130575913057591306676918Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative tRNA pseudouridine synthase B3e-2099.8
NC_014909:86000:120743120743121501759Candidatus Blochmannia vafer str. BVAF chromosome, complete genometRNA pseudouridine synthase B3e-2099.8
NC_003909:3587695:359587335958733596796924Bacillus cereus ATCC 10987, complete genometRNA pseudouridine synthase B4e-2099.4
NC_009253:2139379:214464121446412145573933Desulfotomaculum reducens MI-1 chromosome, complete genometRNA pseudouridine synthase B4e-2099.4
NC_017200:3655496:366487236648723665795924Bacillus thuringiensis serovar finitimus YBT-020 chromosome,tRNA pseudouridine synthase B5e-2099
NC_014171:3701051:370711537071153708038924Bacillus thuringiensis BMB171 chromosome, complete genometRNA pseudouridine synthase B5e-2099
NC_017208:3816753:382320538232053824128924Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetRNA pseudouridine synthase B5e-2099
NC_008529:1133665:115156811515681152464897Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePseudouridine synthase6e-2098.6
NC_011772:3787500:379357137935713794494924Bacillus cereus G9842, complete genometRNA pseudouridine synthase B6e-2098.6
NC_011969:3549000:355514835551483556071924Bacillus cereus Q1 chromosome, complete genometRNA pseudouridine synthase b7e-2098.6
NC_012880:3915500:391605739160573917013957Dickeya dadantii Ech703, complete genometRNA pseudouridine synthase B8e-2098.2
NC_021175:751616:759075759075759953879Streptococcus oligofermentans AS 1.3089, complete genometRNA pseudouridine synthase B9e-2098.2
NC_011658:3603009:361118636111863612109924Bacillus cereus AH187 chromosome, complete genometRNA pseudouridine synthase B1e-1997.8
NC_013939:1535071:154306215430621543958897Deferribacter desulfuricans SSM1, complete genometRNA pseudouridine synthase B1e-1997.8
NC_007645:1245927:125471412547141255649936Hahella chejuensis KCTC 2396, complete genometRNA pseudouridine synthase B2e-1997.1
NC_013517:2437574:245682624568262457668843Sebaldella termitidis ATCC 33386, complete genometRNA pseudouridine synthase B2e-1996.7
NC_004432:1225077:124554412455441246242699Mycoplasma penetrans HF-2, complete genometRNA pseudouridine 5S synthase5e-1995.9
NC_006369:3058000:306608530660853066996912Legionella pneumophila str. Lens, complete genometRNA pseudouridine synthase B7e-1995.1
NC_013730:933089:955288955288956013726Spirosoma linguale DSM 74, complete genometRNA pseudouridine synthase B1e-1894
NC_016893:563890:578710578710579636927Wigglesworthia glossinidia endosymbiont of Glossina morsitanstRNA U55 pseudouridine synthase7e-1891.7
NC_009613:2697913:270049127004912701195705Flavobacterium psychrophilum JIP02/86, complete genometRNA pseudouridine synthase B5e-1789
NC_004722:3777907:378397037839703784818849Bacillus cereus ATCC 14579, complete genometRNA pseudouridine synthase B1e-1687.4
NC_011653:1339868:134693013469301347850921Thermosipho africanus TCF52B, complete genometRNA pseudouridine synthase B2e-1687
NC_016771:3555506:356368335636833564531849Bacillus cereus NC7401, complete genometRNA pseudouridine synthase B4e-1686.3
NC_014758:1349494:135490313549031355808906Calditerrivibrio nitroreducens DSM 19672 chromosome, completetRNA pseudouridine synthase b1e-1584.7
NC_004344:257471:263762263762264745984Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1378.2
NC_013861:311908:331682331682332590909Legionella longbeachae NSW150, complete genometRNA pseudouridine synthase B4e-1376.3
NC_011295:847903:847043847043847915873Coprothermobacter proteolyticus DSM 5265, complete genometRNA pseudouridine synthase B5e-1272.4
NC_014507:374359:396499396499397416918Methanoplanus petrolearius DSM 11571 chromosome, complete genomepseudouridylate synthase TruB domain-containing protein2e-1067
NC_009635:1283830:129106212910621292057996Methanococcus aeolicus Nankai-3 chromosome, complete genomeH/ACA RNA-protein complex component Cbf5p6e-1065.5
NC_003364:484293:4993814993815003821002Pyrobaculum aerophilum str. IM2, complete genometRNA pseudouridine synthase B2e-0757.4
NC_010482:1540011:155507515550751556052978Candidatus Korarchaeum cryptofilum OPF8, complete genomePseudouridylate synthase5e-0755.8
NC_019942:987134:100907710090771009931855Aciduliprofundum sp. MAR08-339, complete genome7e-0755.1