Pre_GI: BLASTN Hits

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Query: NC_021182:966839 Clostridium pasteurianum BC1, complete genome

Start: 966839, End: 984959, Length: 18121

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome3e-21111BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012563:122000*12200014417822179Clostridium botulinum A2 str. Kyoto, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome2e-18101BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome3e-21111BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome8e-0660BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome8e-0660BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome1e-20109BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome2e-18101BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome4e-23117BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_014328:34829803482980351005727078Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_014328:85290*8529014387558586Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome6e-47196BLASTN svgBLASTP svg
NC_021182:40880004088000411160223603Clostridium pasteurianum BC1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_021182:1346261*1346261136580919549Clostridium pasteurianum BC1, complete genome1e-20109BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome5e-38167BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome1e-29139BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome7e-28133BLASTN svgBLASTP svg
NC_021182:4829000*4829000485931530316Clostridium pasteurianum BC1, complete genome3e-27131BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome4e-26127BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome2e-25125BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_021182:48824944882494490859926106Clostridium pasteurianum BC1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome2e-25125BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_021182:2422226*2422226244735325128Clostridium pasteurianum BC1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg