Pre_GI: BLASTP Hits

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Query: NC_021182:4829000:4840132 Clostridium pasteurianum BC1, complete genome

Start: 4840132, End: 4841256, Length: 1125

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:2921000:2922479292247929236031125Clostridium pasteurianum BC1, complete genometransposase family protein0706
NC_010628:2136995:2150076215007621512211146Nostoc punctiforme PCC 73102, complete genometransposase, IS4 family protein8e-1685.1
NC_010162:9727465:974248097424809743346867Sorangium cellulosum 'So ce 56', complete genometransposase6e-1168.9
NC_015711:606306:6144876144876156441158Myxococcus fulvus HW-1 chromosome, complete genometransposase IS4 family protein1e-1067.8
NC_011749:34056:4120341203423301128Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetransposase, IS4 family, IS102e-0963.5
NC_006905:3780000:3792031379203137932391209Salmonella enterica subsp. enterica serovar Choleraesuis strtransposase of Tn103e-0963.2
NC_020418:448687:4535674535674547751209Morganella morganii subsp. morganii KT, complete genomeMobile element protein3e-0963.2
NC_011147:4460726:4489020448902044902281209Salmonella enterica subsp. enterica serovar Paratyphi A strIS10 transposase3e-0963.2
NC_012947:1769438:1795281179528117964891209Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein3e-0963.2
NC_011149:309556:3314183314183326261209Salmonella enterica subsp. enterica serovar Agona str. SL483,IS10 transposase3e-0963.2
NC_010939:1986263:2027359202735920285671209Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeiso-IS10R ORF3e-0963.2
NC_006905:946418:9586169586169598241209Salmonella enterica subsp. enterica serovar Choleraesuis strtransposase of Tn103e-0963.2
NC_010939:405477:4133794133794145871209Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeiso-IS10R ORF3e-0963.2
NC_010498:4856011:4872207487220748734151209Escherichia coli SMS-3-5, complete genomeIS10 transposase3e-0963.2
NC_006905:3717306:3738634373863437398421209Salmonella enterica subsp. enterica serovar Choleraesuis strtransposase of Tn103e-0963.2
NC_009633:337706:3428083428083440161209Alkaliphilus metalliredigens QYMF chromosome, complete genometransposase, IS4 family protein3e-0963.2
NC_012947:1769438:1791810179181017930181209Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein3e-0963.2
NC_020418:448687:4612914612914624991209Morganella morganii subsp. morganii KT, complete genomeMobile element protein3e-0963.2
CU928145:3360967:3388044338804433892521209Escherichia coli 55989 chromosome, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_011748:3360967:3388044338804433892521209Escherichia coli 55989, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_004337:1065609:1076772107677210779801209Shigella flexneri 2a str. 301, complete genomeiso-IS10R ORF4e-0962.8
NC_004337:2185282:2186692218669221879001209Shigella flexneri 2a str. 301, complete genomeiso-IS10R ORF4e-0962.8
NC_003198:1908238:1917993191799319192011209Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transposase4e-0962.8
CU928145:4950723:4967418496741849686261209Escherichia coli 55989 chromosome, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_011748:4950723:4976480497648049776881209Escherichia coli 55989, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_003384:157158:1832301832301844381209Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtransposase4e-0962.8
NC_004337:3049118:3077718307771830789261209Shigella flexneri 2a str. 301, complete genomeiso-IS10R ORF4e-0962.8
CU928145:4950723:4969248496924849704561209Escherichia coli 55989 chromosome, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_011748:4950723:4969248496924849704561209Escherichia coli 55989, complete genometransposase, IS4 family, IS10L4e-0962.8
CU928145:4950723:4976480497648049776881209Escherichia coli 55989 chromosome, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_011083:4547825:4600289460028946014971209Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase (IS4 family)4e-0962.8
NC_004337:2035945:2047253204725320484611209Shigella flexneri 2a str. 301, complete genomeiso-IS10R ORF4e-0962.8
NC_011748:4950723:4967418496741849686261209Escherichia coli 55989, complete genometransposase, IS4 family, IS10L4e-0962.8
NC_004337:3049118:3099723309972331009311209Shigella flexneri 2a str. 301, complete genomeiso-IS10R ORF5e-0962.4