Pre_GI: BLASTP Hits

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Query: NC_021182:4602683:4609471 Clostridium pasteurianum BC1, complete genome

Start: 4609471, End: 4609929, Length: 459

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003030:3324834:333148533314853331946462Clostridium acetobutylicum ATCC 824, complete genomeTransciptional regulator CTSR5e-42169
NC_015687:3326461:333311233331123333573462Clostridium acetobutylicum DSM 1731 chromosome, complete genometransciptional regulator CTSR5e-42169
NC_012658:3827500:383301938330193833483465Clostridium botulinum Ba4 str. 657 chromosome, complete genometransciptional repressor CtsR4e-38156
NC_010516:3807780:381329438132943813758465Clostridium botulinum B1 str. Okra, complete genometransciptional repressor CtsR1e-37155
NC_010520:3837378:384289238428923843356465Clostridium botulinum A3 str. Loch Maree, complete genometransciptional repressor CtsR1e-37155
NC_012563:4004709:401022240102224010686465Clostridium botulinum A2 str. Kyoto, complete genometransciptional repressor CtsR1e-37155
NC_009495:3735703:374229637422963742760465Clostridium botulinum A str. ATCC 3502 chromosome, complete genometransciptional repressor CtsR1e-37155
NC_009697:3711692:371828537182853718749465Clostridium botulinum A str. ATCC 19397 chromosome, completetransciptional repressor CtsR1e-37155
NC_009698:3609881:361539436153943615858465Clostridium botulinum A str. Hall chromosome, complete genometransciptional repressor CtsR1e-37155
NC_009699:3839575:384508938450893845553465Clostridium botulinum F str. Langeland chromosome, complete genometransciptional repressor CtsR1e-37155
NC_017297:3838189:384370338437033844167465Clostridium botulinum F str. 230613 chromosome, complete genometransciptional repressor CtsR1e-37155
NC_015425:198315:207543207543208001459Clostridium botulinum BKT015925 chromosome, complete genometranscription regulator ctsR3e-37153
NC_014328:4471995:447758344775834478065483Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional repressor4e-37153
NC_009706:165913:181307181307181792486Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator3e-35147
NC_011837:165913:181307181307181792486Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-35147
NC_004557:2777291:278374227837422784200459Clostridium tetani E88, complete genometranscriptional regulator ctsR2e-35147
NC_008593:196257:202869202869203327459Clostridium novyi NT, complete genometranscription regulator ctsR2e-33141
NC_010674:192951:213673213673214128456Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulator CtsR6e-33139
NC_010723:173280:215468215468215923456Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulator CtsR8e-33139
NC_013316:1:407064070641170465Clostridium difficile R20291, complete genometranscriptional regulator3e-30130
NC_008262:2649289:265847126584712658926456Clostridium perfringens SM101, complete genometranscriptional repressor7e-28122
NC_008261:3014373:301492030149203015375456Clostridium perfringens ATCC 13124, complete genometranscriptional repressor2e-27120
NC_003366:2788268:279228127922812792736456Clostridium perfringens str. 13, complete genometranscriptional repressor of class III stress genes2e-27120
NC_020134:301500:304168304168304626459Clostridium stercorarium subsp. stercorarium DSM 8532, completetranscriptional regulator CtsR2e-25114
NC_009012:2100000:211548221154822115943462Clostridium thermocellum ATCC 27405, complete genomeFirmicute transcriptional repressor of class III stress genes2e-23107
NC_004193:79588:109439109439109906468Oceanobacillus iheyensis HTE831, complete genometranscriptional repressor of class III stress genes6e-22103
NC_007503:2098980:210770621077062108179474Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator CtsR6e-22102
NC_015565:173774:191692191692192219528Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetranscriptional repressor, CtsR7e-22102
NC_004461:277291:282683282683283144462Staphylococcus epidermidis ATCC 12228, complete genomectsR protein2e-21101
NC_002570:126500:132792132792133262471Bacillus halodurans C-125, complete genometranscriptional repressor of class III stress genes8e-2199
NC_014219:83888:102499102499102975477Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional repressor, CtsR1e-2098.6
NC_019970:336472:346874346874347386513Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional repressor of class III stress genes2e-2098.2
NC_011999:2023248:202463920246392025112474Macrococcus caseolyticus JCSC5402, complete genometranscriptional regulator CtsR6e-2096.3
NC_014152:241776:260413260413260871459Thermincola sp. JR, complete genometranscriptional repressor, CtsR7e-2095.9
NC_010382:4479464:449712544971254497622498Lysinibacillus sphaericus C3-41, complete genometranscriptional regulator2e-1994.7
NC_011567:75306:889368893689397462Anoxybacillus flavithermus WK1, complete genomeTranscriptional repressor of class III stress genes, CtsR4e-1993.6
NC_007929:210088:231806231806232273468Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator ctsR4e-1993.6
NC_015975:267994:280758280758281225468Lactobacillus ruminis ATCC 27782 chromosome, complete genometranscriptional regulator6e-1992.8
NC_004668:3156247:316002431600243160491468Enterococcus faecalis V583, complete genometranscriptional regulator CtsR1e-1892
NC_018704:81733:107065107065107526462Amphibacillus xylanus NBRC 15112, complete genometranscriptional regulator CtsR2e-1891.3
NC_011899:86800:102182102182102655474Halothermothrix orenii H 168, complete genometranscriptional repressor, CtsR2e-1891.3
NC_019903:421000:426292426292426762471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transcriptional repressor of class III stress genes3e-1890.9
NC_018665:71677:929409294093395456Exiguobacterium antarcticum B7 chromosome, complete genomeTranscriptional repressor, CtsR8e-1889.4
NC_010556:71776:930049300493459456Exiguobacterium sibiricum 255-15, complete genometranscriptional repressor, CtsR9e-1889
NC_017208:64500:963459634596806462Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator ctsR2e-1787.8
NC_015757:263938:281351281351281815465Sulfobacillus acidophilus TPY chromosome, complete genometranscriptional repressor2e-1684.3
NC_016884:256598:274011274011274475465Sulfobacillus acidophilus DSM 10332 chromosome, complete genometranscriptional regulator2e-1684.3
NC_014378:131810:144249144249144734486Acetohalobium arabaticum DSM 5501 chromosome, complete genometranscriptional repressor, CtsR1e-1582
NC_013199:2536705:254329625432962543763468Lactobacillus rhamnosus Lc 705, complete genometranscriptional regulator CtsR2e-1581.3
NC_014654:2138794:214546121454612145928468Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscriptional repressor, CtsR9e-1579
NC_008526:2489196:249934724993472499814468Lactobacillus casei ATCC 334, complete genomeTranscriptional repressor of class III stress genes3e-1477.4
NC_012673:1600242:160753316075331608009477Exiguobacterium sp. AT1b, complete genometranscriptional repressor, CtsR4e-1477
NC_009785:2049395:205183120518312052289459Streptococcus gordonii str. Challis substr. CH1, complete genometranscription regulator ctsR8e-1475.9
NC_012925:1776450:179294117929411793399459Streptococcus suis P1/7, complete genometranscriptional regulator8e-1372.8
NC_009442:1865244:188173618817361882194459Streptococcus suis 05ZYH33 chromosome, complete genomeCtsR family transcriptional regulator8e-1372.8
NC_009443:1860390:188110918811091881567459Streptococcus suis 98HAH33, complete genometranscriptional regulator CtsR8e-1372.8
NC_012924:1860631:188135018813501881808459Streptococcus suis SC84, complete genometranscriptional regulator8e-1372.8
NC_012926:1910882:193160119316011932059459Streptococcus suis BM407 chromosome, complete genometranscriptional regulator8e-1372.8
NC_015678:1443178:144887114488711449335465Streptococcus parasanguinis ATCC 15912 chromosome, complete genometranscriptional regulator CtsR7e-1372.8
NC_004116:1827351:182735118273511827815465Streptococcus agalactiae 2603V/R, complete genometranscriptional regulator CtsR1e-1168.9